RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 FKBP3Q00688 224 aaKnown RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 FOLH1Q04609 750 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 ZBTB16Q05516 673 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 WASHC5Q12768 1159 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 TFCP2Q12800 502 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 IKQ13123 557 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 SMAD4Q13485 552 aaKnown RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 RRP1BQ14684 758 aaKnown RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 C16orf72Q14CZ0 275 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 WTAPQ15007 396 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 DLGAP5Q15398 846 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 TRADDQ15628 312 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 MYLK3Q32MK0 819 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 EDRF1Q3B7T1 1238 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 NADK2Q4G0N4 442 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 ZC2HC1CQ53FD0 456 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 EFHC1Q5JVL4 640 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 WDR45BQ5MNZ6 344 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 FAM83BQ5T0W9 1011 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 OGFRL1Q5TC84 451 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 METTL21CQ5VZV1 264 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 SIGIRRQ6IA17 410 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 CGB2Q6NT52 195 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 C15orf52Q6ZUT6 534 aaKnown RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 LIMS2Q7Z4I7 341 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 ARPINQ7Z6K5 226 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 HEATR4Q86WZ0 1026 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 DCP2Q8IU60 420 aaKnown RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 TPH2Q8IWU9 490 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 SPARTQ8N0X7 666 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 ANKRD42Q8N9B4 389 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 CHST13Q8NET6 341 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 TOR1AIP2Q8NFQ8 470 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 RAB3IL1Q8TBN0 382 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 SUN5Q8TC36 379 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 FBXO25Q8TCJ0 367 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 ADAMTS16Q8TE57 1224 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 RFFLQ8WZ73 363 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 CDKL2Q92772 493 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 ZBTB8AQ96BR9 441 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 MTBPQ96DY7 904 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 HSPBAP1Q96EW2 488 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 CEP95Q96GE4 821 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 PLEKHA8Q96JA3 519 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 CEP19Q96LK0 163 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 ZNF641Q96N77 438 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 AIFM3Q96NN9 605 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 GPR101Q96P66 508 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 PPP1R10Q96QC0 940 aaKnown RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 RMDN3Q96TC7 470 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 TTC1Q99614 292 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 MXD3Q9BW11 206 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 LRRC3Q9BY71 257 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 MRPL1Q9BYD6 325 aaKnown RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 YTHDF1Q9BYJ9 559 aaKnown RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 INO80BQ9C086 356 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 SENP6Q9GZR1 1112 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 WNT8AQ9H1J5 351 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 SEMA4AQ9H3S1 761 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 HIPK3Q9H422 1215 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 EHMT1Q9H9B1 1298 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 C8orf4Q9NR00 106 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 SH3GLB2Q9NR46 395 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 FAM207AQ9NSI2 230 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 MCM9Q9NXL9 1143 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 PRR13Q9NZ81 148 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 SMARCAL1Q9NZC9 954 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 GRHL1Q9NZI5 618 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 TAGLN3Q9UI15 199 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 TFR2Q9UP52 801 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 INVSQ9Y283 1065 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.85□□□□□ -1.63
PTCD3-212ENST00000477520 TIMM22Q9Y584 194 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 MAD1L1Q9Y6D9 718 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 CEPT1Q9Y6K0 416 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 ZNF804BA4D1E1 1349 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 UBE4BO95155 1302 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 LTBP3Q9NS15 1303 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 ZMYM2Q9UBW7 1377 aa4.85□□□□□ -1.63
PTCD3-212ENST00000477520 LRRC37AA6NMS7 1700 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 KIAA1551Q9HCM1 1747 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 SF3B1O75533 1304 aaKnown RBP eCLIP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 A0A087X0B3 334 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 SMIM23A6NLE4 172 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 TRIM64CA6NLI5 447 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 C9IYK1 514 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 RNF103O00237 685 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 TEX28O15482 410 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 SORBS3O60504 671 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 NOL3O60936 208 aaKnown RBP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 GMNNO75496 209 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 SULT1C4O75897 302 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 FAM155BO75949 473 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 KLHL2O95198 593 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 CBX6O95503 412 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 BAG2O95816 211 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 FGGP02679 453 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 CAPNS1P04632 268 aa4.84□□□□□ -1.63
PTCD3-212ENST00000477520 PLEKP08567 350 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-212ENST00000477520 UQCRFS1P1P0C7P4 283 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms