RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 AVPR2P30518 371 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 DNA2P51530 1060 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 CLCN5P51795 746 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 PLK1P53350 603 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 MTAPQ13126 283 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 C1orf228Q6PIY5 440 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 LINGO4Q6UY18 593 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 ARHGAP36Q6ZRI8 547 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 PEX26Q7Z412 305 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 SETD3Q86TU7 594 aaPredicted RBP16.28■□□□□ 0.2
COPS3-207ENST00000477299 CCDC117Q8IWD4 279 aaPredicted RBP16.28■□□□□ 0.2
COPS3-207ENST00000477299 ARHGAP12Q8IWW6 846 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 TXLNBQ8N3L3 684 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 ZNF513Q8N8E2 541 aaPredicted RBP16.28■□□□□ 0.2
COPS3-207ENST00000477299 IL17RCQ8NAC3 791 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 ARHGEF2Q92974 986 aaKnown RBP16.28■□□□□ 0.2
COPS3-207ENST00000477299 TTC17Q96AE7 1141 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 HMCESQ96FZ2 354 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 MYO19Q96H55 970 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 MRGPRX3Q96LB0 322 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 LRFN3Q9BTN0 628 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 TSGA10Q9BZW7 698 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 SLC39A8Q9C0K1 460 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 CACNA2D2Q9NY47 1150 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 AMFRQ9UKV5 643 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 STARD13Q9Y3M8 1113 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 PCDHA3Q9Y5H8 950 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 EML5Q05BV3 1969 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 ILVBLA1L0T0 632 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 PSTPIP1O43586 416 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 ZMPSTE24O75844 475 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 POLR2EP19388 210 aaKnown RBP16.27■□□□□ 0.2
COPS3-207ENST00000477299 CTNNA2P26232 953 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 CTNNA1P35221 906 aaKnown RBP16.27■□□□□ 0.2
COPS3-207ENST00000477299 ARL4AP40617 200 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 IL12RB1P42701 662 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 LRRC32Q14392 662 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 ZNF234Q14588 700 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 PDK2Q15119 407 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 TMEM31Q5JXX7 168 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 TMEM92Q6UXU6 159 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 SUGP1Q8IWZ8 645 aaKnown RBP16.27■□□□□ 0.2
COPS3-207ENST00000477299 KATNAL2Q8IYT4 538 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 AHI1Q8N157 1196 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 UMODL1-AS1Q8N2C9 162 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 TXNDC5Q8NBS9 432 aaKnown RBP16.27■□□□□ 0.2
COPS3-207ENST00000477299 FAF2Q96CS3 445 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 CHRDQ9H2X0 955 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 CATSPERBQ9H7T0 1116 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 THAP10Q9P2Z0 257 aaPredicted RBP16.27■□□□□ 0.2
COPS3-207ENST00000477299 VPS28Q9UK41 221 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 ERVW-1Q9UQF0 538 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 RAD54BQ9Y620 910 aa16.27■□□□□ 0.2
COPS3-207ENST00000477299 RASA4BC9J798 803 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 K7ERQ8 282 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 FGF10O15520 208 aaPredicted RBP16.26■□□□□ 0.19
COPS3-207ENST00000477299 RASA4O43374 803 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 SMAD6O43541 496 aaKnown RBP16.26■□□□□ 0.19
COPS3-207ENST00000477299 CD160O95971 181 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 PYGMP11217 842 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 COL9A1P20849 921 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 CDKN2BP42772 138 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 RPS9P46781 194 aaKnown RBP16.26■□□□□ 0.19
COPS3-207ENST00000477299 MAPKAPK2P49137 400 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 ARF5P84085 180 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 SLC10A2Q12908 348 aaPredicted RBP16.26■□□□□ 0.19
COPS3-207ENST00000477299 ZNF211Q13398 564 aaPredicted RBP16.26■□□□□ 0.19
COPS3-207ENST00000477299 POLD3Q15054 466 aaPredicted RBP16.26■□□□□ 0.19
COPS3-207ENST00000477299 IFI16Q16666 785 aaKnown RBP16.26■□□□□ 0.19
COPS3-207ENST00000477299 C6orf118Q5T5N4 469 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 DCAF12L1Q5VU92 463 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 AFMIDQ63HM1 303 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 NPNTQ6UXI9 565 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 SPOCD1Q6ZMY3 1216 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 WFIKKN2Q8TEU8 576 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 HES6Q96HZ4 224 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 RNF157Q96PX1 679 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 ACE2Q9BYF1 805 aaPredicted RBP16.26■□□□□ 0.19
COPS3-207ENST00000477299 LRRC19Q9H756 370 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 ATP13A1Q9HD20 1204 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 DDX56Q9NY93 547 aaKnown RBP16.26■□□□□ 0.19
COPS3-207ENST00000477299 VPS51Q9UID3 782 aa16.26■□□□□ 0.19
COPS3-207ENST00000477299 TTC34A8MYJ7 566 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 PRR33A8MZF0 331 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 J3KR12 359 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 CBX4O00257 560 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 NCAM2O15394 837 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 RAMP2O60895 175 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 VAV1P15498 845 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 PRKCHP24723 683 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 HTR7P34969 479 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 PAPOLAP51003 745 aaKnown RBP16.25■□□□□ 0.19
COPS3-207ENST00000477299 MRPS21P82921 87 aaKnown RBP16.25■□□□□ 0.19
COPS3-207ENST00000477299 SATB1Q01826 763 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 SLC12A1Q13621 1099 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 TAZQ16635 292 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 MEI1Q5TIA1 1274 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 KAZNQ674X7 775 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 NCBP2-AS2Q69YL0 99 aa16.25■□□□□ 0.19
COPS3-207ENST00000477299 IL31Q6EBC2 164 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms