RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 MAST1Q9Y2H9 1570 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 FLNAP21333 2647 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 NEXMIFQ5QGS0 1516 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 MARF1Q9Y4F3 1742 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 GIMAP1-GIMAP5A0A087WTJ2 511 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 FAM237BA0A1B0GVD1 139 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 A0A1W2PQ27 194 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 A0A1W2PQ64 194 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 A0A1W2PQC6 194 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 A0A1W2PQD8 194 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 TRBC2A0A5B9 178 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 SLC9B1P1A6NJY1 282 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 CDRT15L2A8MXV6 281 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 KCNJ18B7U540 433 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 TEX22C9J3V5 150 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 J3KTA2 159 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 ACOT7O00154 380 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 SLC33A1O00400 549 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 NFIBO00712 420 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 IFIT3O14879 490 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 ANGPT2O15123 496 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 CD3EAPO15446 510 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 ZSCAN9O15535 394 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 SLC25A17O43808 307 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 CEP104O60308 925 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 ADAMTS4O75173 837 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 OR2C1O95371 312 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PROCP04070 461 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 TUBBP07437 444 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 GRPP07492 148 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 HMOX1P09601 288 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 C1SP09871 688 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 GHRP10912 638 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 SELLP14151 372 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 IL2RBP14784 551 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 TMEM11P17152 192 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PTGS1P23219 599 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 HOXD10P28358 340 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 STIP1P31948 543 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 SOAT1P35610 550 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 GNL1P36915 607 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 IL15P40933 162 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 PNPLA4P41247 253 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 MAGEA4P43358 317 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 SLC15A1P46059 708 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 MAP2K3P46734 347 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 ATP5OP48047 213 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 KHKP50053 298 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 SNU13P55769 128 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 UCP3P55916 312 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PSMC6P62333 389 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 TUBB4BP68371 445 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 CCNA1P78396 465 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 ADAM17P78536 824 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 MRPS5P82675 430 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 COG7P83436 770 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 DEUP1Q05D60 604 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PPATQ06203 517 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 GABPB1Q06547 395 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 TNK2Q07912 1038 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 DBPQ10586 325 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 SMAD4Q13485 552 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 SNX1Q13596 522 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 TUBB2AQ13885 445 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 CBFBQ13951 182 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 BOP1Q14137 746 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 GAS6Q14393 721 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 KCNJ12Q14500 433 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 GRM4Q14833 912 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 SYCP1Q15431 976 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 NPY5RQ15761 445 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 SHROOM1Q2M3G4 852 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 MST1LQ2TV78 715 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 DEFB115Q30KQ5 88 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PABPC1LQ4VXU2 614 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 ZNF766Q5HY98 468 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 MCTP1Q6DN14 999 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 GRAMD4Q6IC98 578 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 TTI2Q6NXR4 508 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 CDC73Q6P1J9 531 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 TMC5Q6UXY8 1006 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PPP1R21Q6ZMI0 780 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 Q6ZVL8 140 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PTCHD4Q6ZW05 846 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PARS2Q7L3T8 475 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 TMPRSS7Q7RTY8 843 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 CTU1Q7Z7A3 348 aaKnown RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 TAF8Q7Z7C8 310 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 HOOK3Q86VS8 718 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 ARHGAP12Q8IWW6 846 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 FAM185AQ8N0U4 392 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 PTGR2Q8N8N7 351 aaPredicted RBP3□□□□□ -1.93
HMGN4-202ENST00000477243 MCUQ8NE86 351 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 OR56B2PQ8NGI1 322 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 RASSF8Q8NHQ8 419 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 RFWD2Q8NHY2 731 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 UBASH3BQ8TF42 649 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 SLC5A11Q8WWX8 675 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 SEC14L1Q92503 715 aa3□□□□□ -1.93
HMGN4-202ENST00000477243 CASP10Q92851 521 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms