RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 PAFAH1B3Q15102 231 aaKnown RBP13.68□□□□□ -0.22
HDAC7-221ENST00000477203 RNF19BQ6ZMZ0 732 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 OTOAQ7RTW8 1153 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 SLC25A41Q8N5S1 370 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 FBXO32Q969P5 355 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 MOCOSQ96EN8 888 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 SLC39A8Q9C0K1 460 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 EBF2Q9HAK2 575 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 XAB2Q9HCS7 855 aaKnown RBP13.68□□□□□ -0.22
HDAC7-221ENST00000477203 LMCD1Q9NZU5 365 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 KLHL14Q9P2G3 628 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 TXNDC16Q9P2K2 825 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 PCDHB8Q9UN66 801 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 MOXD2PA6NHM9 499 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 CABYRO75952 493 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 F9P00740 461 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 ALDH2P05091 517 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 SNRPAP09012 282 aaKnown RBP13.68□□□□□ -0.22
HDAC7-221ENST00000477203 DNAJB2P25686 324 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 CCR1P32246 355 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 CHRNA4P43681 627 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 TTC39BQ5VTQ0 682 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-221ENST00000477203 PM20D1Q6GTS8 502 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 PDZD4Q76G19 769 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-221ENST00000477203 ATPAF2Q8N5M1 289 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 MAGEC3Q8TD91 643 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 MLPHQ9BV36 600 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-221ENST00000477203 VPS11Q9H270 941 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 ZFATQ9P243 1243 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 CDY1Q9Y6F8 540 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 THSD7BQ9C0I4 1608 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 MYO16Q9Y6X6 1858 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 HMX2A2RU54 273 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 DPPA5A6NC42 116 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 TNFRSF10BO14763 440 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 PRPF4O43172 522 aaKnown RBP eCLIP13.68□□□□□ -0.22
HDAC7-221ENST00000477203 SKIP12755 728 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 ABL2P42684 1182 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 SCNN1BP51168 640 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 SEMA3BQ13214 749 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 SEPT6Q14141 434 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 DLG2Q15700 870 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 PARP6Q2NL67 630 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 RAP1GAP2Q684P5 730 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.68□□□□□ -0.22
HDAC7-221ENST00000477203 CNTD1Q8N815 330 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 RFWD2Q8NHY2 731 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 ARNTL2Q8WYA1 636 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 OXNAD1Q96HP4 312 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-221ENST00000477203 GORASP1Q9BQQ3 440 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.68□□□□□ -0.221e-6■■■■□ 24.8
HDAC7-221ENST00000477203 CCSER2Q9H7U1 834 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 ABCC13Q9NSE7 274 aa13.68□□□□□ -0.22
HDAC7-221ENST00000477203 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-221ENST00000477203 CCL22O00626 93 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 GJB3O75712 270 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 DSC1Q08554 894 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 MAPRE1Q15691 268 aaKnown RBP13.67□□□□□ -0.22
HDAC7-221ENST00000477203 BNIPLQ7Z465 357 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 BCL7CQ8WUZ0 217 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-221ENST00000477203 ERP27Q96DN0 273 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 LBHD1Q9BQE6 289 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-221ENST00000477203 DHRS4Q9BTZ2 278 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 CCDC134Q9H6E4 229 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 PCDHA11Q9Y5I1 949 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 ACTL7BQ9Y614 415 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 HS3ST4Q9Y661 456 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 ANKRD12Q6UB98 2062 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 TSC2P49815 1807 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 HACD1B0YJ81 288 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 C1QAP02745 245 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 TPSB2P20231 275 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 FDFT1P37268 417 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 GLUD2P49448 558 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 TPSAB1Q15661 275 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 PDCD2Q16342 344 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-221ENST00000477203 PDK4Q16654 411 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 ALFQ53S48 1182 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 NUP93Q8N1F7 819 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 MCUQ8NE86 351 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 AUTS2Q8WXX7 1259 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 NTAN1Q96AB6 310 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 TMEM237Q96Q45 408 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 NACA2Q9H009 215 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 MANSC1Q9H8J5 431 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 RCOR3Q9P2K3 495 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-221ENST00000477203 PCDHB5Q9Y5E4 795 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 ACTL7AQ9Y615 435 aa13.67□□□□□ -0.22
HDAC7-221ENST00000477203 SLC12A8A0AV02 714 aa13.66□□□□□ -0.22
HDAC7-221ENST00000477203 RTN3O95197 1032 aaPredicted RBP13.66□□□□□ -0.22
HDAC7-221ENST00000477203 EOMESO95936 686 aa13.66□□□□□ -0.22
HDAC7-221ENST00000477203 CCNB1P14635 433 aa13.66□□□□□ -0.22
HDAC7-221ENST00000477203 EML3Q32P44 896 aa13.66□□□□□ -0.22
HDAC7-221ENST00000477203 RASIP1Q5U651 963 aa13.66□□□□□ -0.22
HDAC7-221ENST00000477203 RFWD3Q6PCD5 774 aa13.66□□□□□ -0.22
HDAC7-221ENST00000477203 DCP1BQ8IZD4 617 aaKnown RBP13.66□□□□□ -0.22
HDAC7-221ENST00000477203 AGR3Q8TD06 166 aa13.66□□□□□ -0.22
HDAC7-221ENST00000477203 BRD8Q9H0E9 1235 aa13.66□□□□□ -0.22
HDAC7-221ENST00000477203 SENP1Q9P0U3 644 aa13.66□□□□□ -0.22
HDAC7-221ENST00000477203 ARL2BPQ9Y2Y0 163 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms