RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ST8SIA6P61647 398 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 STIM1Q13586 685 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 LRRC14Q15048 493 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 STILQ15468 1287 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 SGO2Q562F6 1265 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 ARHGAP17Q68EM7 881 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 SPOPLQ6IQ16 392 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 KIAA1211LQ6NV74 962 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 GK5Q6ZS86 529 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 TMPRSS6Q8IU80 811 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 SFTPA1Q8IWL2 248 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 UNC45BQ8IWX7 931 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 GALNT15Q8N3T1 639 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 SVOPQ8N4V2 548 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 FRMD1Q8N878 549 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 ANKRD52Q8NB46 1076 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 OR2T3Q8NH03 318 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 PLEKHO2Q8TD55 490 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 SETD7Q8WTS6 366 aaKnown RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 DNASE2BQ8WZ79 361 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 GATA6Q92908 595 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 TRIM11Q96F44 468 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 TOE1Q96GM8 510 aaKnown RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 SEC16BQ96JE7 1060 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 TRIM62Q9BVG3 475 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 GPR174Q9BXC1 333 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 ZDHHC4Q9NPG8 344 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 ABCC13Q9NSE7 274 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 RAB20Q9NX57 234 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 USP36Q9P275 1121 aaKnown RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 PCDHGB2Q9Y5G2 931 aa7.57□□□□□ -1.2
BRCA1-214ENST00000477152 MAP1BP46821 2468 aaKnown RBP7.57□□□□□ -1.2
BRCA1-214ENST00000477152 ASCC3Q8N3C0 2202 aaKnown RBP7.56□□□□□ -1.2
BRCA1-214ENST00000477152 PCNX2A6NKB5 2137 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 LOC100289279A0A1B0GTE1 492 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 A0A1B0GVL5 298 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 GOLGA6L4A6NEF3 574 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 HHLA1C9JL84 531 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 XPO1O14980 1071 aaKnown RBP7.56□□□□□ -1.2
BRCA1-214ENST00000477152 DNTTP04053 509 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 HMBSP08397 361 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 SETSIPP0DME0 302 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 CDK4P11802 303 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 SLC11A2P49281 568 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 ARL4DP49703 201 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 AFF3P51826 1226 aaKnown RBP7.56□□□□□ -1.2
BRCA1-214ENST00000477152 TKTL1P51854 596 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 CLCQ05315 142 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 MESP2Q0VG99 397 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 BST2Q10589 180 aaKnown RBP7.56□□□□□ -1.2
BRCA1-214ENST00000477152 FUT11Q495W5 492 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 FNDC3BQ53EP0 1204 aaKnown RBP7.56□□□□□ -1.2
BRCA1-214ENST00000477152 DCAF12L1Q5VU92 463 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 TCERG1LQ5VWI1 586 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 FBXW10Q5XX13 1052 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 TOGARAM2Q6ZUX3 1019 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 REC114Q7Z4M0 266 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 DENND1CQ8IV53 801 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 SLC41A1Q8IVJ1 513 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 SLITRK4Q8IW52 837 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 GRAMD1CQ8IYS0 662 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 AHI1Q8N157 1196 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 CACTIN-AS1Q8N1I8 211 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 TAS1R2Q8TE23 839 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 UBASH3BQ8TF42 649 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 ADAMTS14Q8WXS8 1223 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 ANAPC16Q96DE5 110 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 TMA16Q96EY4 203 aaKnown RBP7.56□□□□□ -1.2
BRCA1-214ENST00000477152 LHX5Q9H2C1 402 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 NMUR1Q9HB89 426 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 CISHQ9NSE2 258 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 PLK2Q9NYY3 685 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 HMGXB4Q9UGU5 601 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 AGO1Q9UL18 857 aaKnown RBP7.56□□□□□ -1.2
BRCA1-214ENST00000477152 WASF3Q9UPY6 502 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 POLR3KQ9Y2Y1 108 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-214ENST00000477152 RAD54BQ9Y620 910 aa7.56□□□□□ -1.2
BRCA1-214ENST00000477152 EPG5Q9HCE0 2579 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 A0A1W2PQ27 194 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 A0A1W2PQ64 194 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 SRRM3A6NNA2 597 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-214ENST00000477152 SLC16A3O15427 465 aaKnown RBP7.55□□□□□ -1.2
BRCA1-214ENST00000477152 IRAK2O43187 625 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 SMC2O95347 1197 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 WISP1O95388 367 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 MOCS3O95396 460 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 IGLV3-19P01714 112 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 VDRP11473 427 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 CD59P13987 128 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 POLR2EP19388 210 aaKnown RBP7.55□□□□□ -1.2
BRCA1-214ENST00000477152 TPMTP51580 245 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 GRIK2Q13002 908 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 ENPP2Q13822 863 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 ZNF234Q14588 700 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 SLC45A4Q5BKX6 768 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 FYB2Q5VWT5 728 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 NUGGCQ68CJ6 796 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 LRSAM1Q6UWE0 723 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 GPRIN1Q7Z2K8 1008 aa7.55□□□□□ -1.2
BRCA1-214ENST00000477152 ADAT2Q7Z6V5 191 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms