RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ACVRL1P37023 503 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 NUMBP49757 651 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 PDIA2Q13087 525 aaKnown RBP14.79□□□□□ -0.04
COL4A6-206ENST00000477085 CBLBQ13191 982 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 PARP6Q2NL67 630 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 ANKMY2Q8IV38 441 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 ATPAF2Q8N5M1 289 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 VN1R2Q8NFZ6 395 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 RIN3Q8TB24 985 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 USP33Q8TEY7 942 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 GDPD5Q8WTR4 605 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 TEKT5Q96M29 485 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 SERPINB12Q96P63 405 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 KLHL8Q9P2G9 620 aaPredicted RBP14.79□□□□□ -0.04
COL4A6-206ENST00000477085 IPO11Q9UI26 975 aaKnown RBP14.79□□□□□ -0.04
COL4A6-206ENST00000477085 REV3LO60673 3130 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 DOCK4Q8N1I0 1966 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 MTCL1Q9Y4B5 1905 aaKnown RBP14.79□□□□□ -0.04
COL4A6-206ENST00000477085 DOCK6Q96HP0 2047 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 SMAPO00193 183 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 NDC80O14777 642 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 MATN3O15232 486 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 CCNB1P14635 433 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 PTPN2P17706 415 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 OR1E1P30953 314 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 IFI35P80217 286 aaPredicted RBP14.78□□□□□ -0.04
COL4A6-206ENST00000477085 OLIG2Q13516 323 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 TEAD2Q15562 447 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 CENPUQ71F23 418 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 ZBED8Q8IZ13 594 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 KRT222Q8N1A0 295 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 PDCD7Q8N8D1 485 aaKnown RBP14.78□□□□□ -0.04
COL4A6-206ENST00000477085 EXOC4Q96A65 974 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 IL12RB2Q99665 862 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 CCL26Q9Y258 94 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 CLUHO75153 1309 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 A0A0D9SEW6 157 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 CCDC195A0A1B0GUA6 201 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 MTSS1O43312 755 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 CACNG3O60359 315 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 STK10O94804 968 aaKnown RBP14.78□□□□□ -0.04
COL4A6-206ENST00000477085 CKMP06732 381 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 TPSB2P20231 275 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 OAS2P29728 719 aaKnown RBP14.78□□□□□ -0.04
COL4A6-206ENST00000477085 FDFT1P37268 417 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 MAGEA3P43357 314 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 ARL4CP56559 192 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 GPX6P59796 221 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 KCNC3Q14003 757 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 TPSAB1Q15661 275 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 TTMPQ5BVD1 217 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 PRSS36Q5K4E3 855 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 CEP85LQ5SZL2 805 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 PPP2R2DQ66LE6 453 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 DENND2CQ68D51 928 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 OTOP3Q7RTS5 596 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 GRASPQ7Z6J2 395 aaPredicted RBP14.78□□□□□ -0.04
COL4A6-206ENST00000477085 C12orf76Q8N812 135 aaPredicted RBP14.78□□□□□ -0.04
COL4A6-206ENST00000477085 MCUQ8NE86 351 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 MAML1Q92585 1016 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 MLPHQ9BV36 600 aaPredicted RBP14.78□□□□□ -0.04
COL4A6-206ENST00000477085 ACBD3Q9H3P7 528 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 TRHDEQ9UKU6 1024 aa14.78□□□□□ -0.04
COL4A6-206ENST00000477085 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.78□□□□□ -0.04
COL4A6-206ENST00000477085 TNRC18O15417 2968 aaPredicted RBP14.77□□□□□ -0.04
COL4A6-206ENST00000477085 ATG2AQ2TAZ0 1938 aa14.77□□□□□ -0.04
COL4A6-206ENST00000477085 NOTCH4Q99466 2003 aa14.77□□□□□ -0.04
COL4A6-206ENST00000477085 TRAV19A0A0A6YYK7 116 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 RAMP2O60895 175 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 HNRNPA1P09651 372 aaKnown RBP eCLIP14.77□□□□□ -0.05
COL4A6-206ENST00000477085 NFKB1P19838 968 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 MAPKAPK2P49137 400 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 CDH4P55283 916 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 SPARCL1Q14515 664 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 POLD3Q15054 466 aaPredicted RBP14.77□□□□□ -0.05
COL4A6-206ENST00000477085 DUSP6Q16828 381 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 BBS9Q3SYG4 887 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 GPR158Q5T848 1215 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 KCTD11Q693B1 232 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 HTR3DQ70Z44 454 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 LRRC49Q8IUZ0 686 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 FAM217AQ8IXS0 508 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 ZSWIM3Q96MP5 696 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 VAT1Q99536 393 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 PRKD2Q9BZL6 878 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 PHACTR1Q9C0D0 580 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 GBA3Q9H227 469 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 TLE6Q9H808 572 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 PLAC1Q9HBJ0 212 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 CFAP97Q9P2B7 532 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 TEX264Q9Y6I9 313 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 DENND4CQ5VZ89 1909 aa14.77□□□□□ -0.05
COL4A6-206ENST00000477085 LEFTY2O00292 366 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 LATS1O95835 1130 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 HLA-DQB2P05538 268 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 NRIP1P48552 1158 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 SERINC3Q13530 473 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 LEKR1Q6ZMV7 388 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 BBS7Q8IWZ6 715 aa14.76□□□□□ -0.05
COL4A6-206ENST00000477085 PDIK1LQ8N165 341 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms