RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 DCAF6Q58WW2 860 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 AGBL4Q5VU57 503 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 KIAA1614Q5VZ46 1190 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 RNF219Q5W0B1 726 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-213ENST00000476777 INO80CQ6PI98 192 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-213ENST00000476777 IGF2-ASQ6U949 168 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 TMC6Q7Z403 805 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 CCDC117Q8IWD4 279 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-213ENST00000476777 CEP57L1Q8IYX8 460 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 FBXL13Q8NEE6 735 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 INTS4Q96HW7 963 aaKnown RBP11.74□□□□□ -0.53
BRCA1-213ENST00000476777 SPAG5Q96R06 1193 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.74□□□□□ -0.53
BRCA1-213ENST00000476777 CAAP1Q9H8G2 361 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 UPF2Q9HAU5 1272 aaKnown RBP11.74□□□□□ -0.53
BRCA1-213ENST00000476777 RAB20Q9NX57 234 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 FAM13BQ9NYF5 915 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 SARDHQ9UL12 918 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 PCDHA7Q9UN72 937 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 CEP83Q9Y592 693 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 U3KQA8 63 aa11.74□□□□□ -0.53
BRCA1-213ENST00000476777 O00370 1275 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 LZTS3O60299 673 aaPredicted RBP11.73□□□□□ -0.53
BRCA1-213ENST00000476777 PIAS2O75928 621 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 SETSIPP0DME0 302 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 CD19P15391 556 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 RGS7P49802 495 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 CSRP3P50461 194 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 MXI1P50539 228 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 SRSF1Q07955 248 aaKnown RBP eCLIP11.73□□□□□ -0.53
BRCA1-213ENST00000476777 KCNMA1Q12791 1236 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 CNTN1Q12860 1018 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 ISXQ2M1V0 245 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 SETMARQ53H47 684 aaPredicted RBP11.73□□□□□ -0.53
BRCA1-213ENST00000476777 PMF1Q6P1K2 205 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 FRS2Q8WU20 508 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 SLC35F5Q8WV83 523 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 IRGQQ8WZA9 623 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 EEF2KMTQ96G04 330 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 SLC39A13Q96H72 371 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 APOLD1Q96LR9 279 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 SLC46A1Q96NT5 459 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 TRPM6Q9BX84 2022 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 OSBPL2Q9H1P3 480 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 XPO7Q9UIA9 1087 aaKnown RBP11.73□□□□□ -0.53
BRCA1-213ENST00000476777 SATB2Q9UPW6 733 aa11.73□□□□□ -0.53
BRCA1-213ENST00000476777 RP1L1Q8IWN7 2480 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-213ENST00000476777 PIK3R2O00459 728 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 RNGTTO60942 597 aaKnown RBP11.72□□□□□ -0.53
BRCA1-213ENST00000476777 LTFP02788 710 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 FYNP06241 537 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 THEGLP0DJG4 465 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 VDRP11473 427 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 RPL13P26373 211 aaKnown RBP11.72□□□□□ -0.53
BRCA1-213ENST00000476777 NNMTP40261 264 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 ME1P48163 572 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 NUMBP49757 651 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 TAS2R38P59533 333 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 ADAM9Q13443 819 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 CUL2Q13617 745 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 LCLAT1Q6UWP7 414 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 PRICKLE2Q7Z3G6 844 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 DSG4Q86SJ6 1040 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 LGI2Q8N0V4 545 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 DQX1Q8TE96 717 aaKnown RBP11.72□□□□□ -0.53
BRCA1-213ENST00000476777 CLEC4CQ8WTT0 213 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 ABCG4Q9H172 646 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 PREBQ9HCU5 417 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 NLGN3Q9NZ94 848 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 IL17BQ9UHF5 180 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 PPM1HQ9ULR3 514 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 TLR6Q9Y2C9 796 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 RELNP78509 3460 aa11.72□□□□□ -0.53
BRCA1-213ENST00000476777 SCAMP1O15126 338 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 SLC31A1O15431 190 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 MOCS2O96007 188 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-213ENST00000476777 ALPPL2P10696 532 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 PRLRP16471 622 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 RBMS1P29558 406 aaKnown RBP11.71□□□□□ -0.53
BRCA1-213ENST00000476777 SULT2A1Q06520 285 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 NNTQ13423 1086 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 C3orf38Q5JPI3 329 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 FAM46CQ5VWP2 391 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 LURAP1LQ8IV03 231 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 UBR7Q8N806 425 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 MAPK15Q8TD08 544 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 OR8D1Q8WZ84 308 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 TFAP2BQ92481 460 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 ATXN7L3BQ96GX2 97 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 PRR11Q96HE9 360 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-213ENST00000476777 SERPINB11Q96P15 392 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 MYOCQ99972 504 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 USP29Q9HBJ7 922 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 TJP2Q9UDY2 1190 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 KIAA1257Q9ULG3 409 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 MAPK8IP1Q9UQF2 711 aa11.71□□□□□ -0.53
BRCA1-213ENST00000476777 COL27A1Q8IZC6 1860 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-213ENST00000476777 PMS2P1A4D2B8 440 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 CDRT15L2A8MXV6 281 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 K7ESM1 405 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms