RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 STX16-NPEPL1H3BU86 382 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 CCNT2O60583 730 aaKnown RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 CSDE1O75534 798 aaKnown RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 CNMDO75829 334 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 PRKCBP05771 671 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 TCN1P20061 433 aaPredicted RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 EIF2B2P49770 351 aaKnown RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 PKNOX1P55347 436 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 HDAC4P56524 1084 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 NIPAL4Q0D2K0 466 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 INCA1Q0VD86 236 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 TTC39BQ5VTQ0 682 aaPredicted RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 JADE1Q6IE81 842 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 ADGRG6Q86SQ4 1221 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 KBTBD6Q86V97 674 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 SNX29P2Q8IUI4 249 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 CCDC33Q8N5R6 958 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 LINC01465Q8N7H1 131 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 ARNTL2Q8WYA1 636 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 USP13Q92995 863 aaPredicted RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 E2F7Q96AV8 911 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 DCPSQ96C86 337 aaKnown RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 GPR20Q99678 358 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 CCT7Q99832 543 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 MRPL4Q9BYD3 311 aaKnown RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 CAAP1Q9H8G2 361 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 CORINQ9Y5Q5 1042 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 PSAT1Q9Y617 370 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 BCLAF3A2AJT9 711 aaKnown RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 LACTBL1A8MY62 500 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 HCRTO43612 131 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 GRAP2O75791 330 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 DGKIO75912 1065 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 ALDH1A2O94788 518 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 FBXO21O94952 628 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 BPGMP07738 259 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 P4HA1P13674 534 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 ENPP1P22413 925 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 ETFBP38117 255 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 CLK1P49759 484 aaKnown RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 ROR1Q01973 937 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 PPM1LQ5SGD2 360 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 TEDDM1Q5T9Z0 273 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 MAP3K21Q5TCX8 1036 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 PMF1Q6P1K2 205 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 PGM2L1Q6PCE3 622 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 AAGABQ6PD74 315 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 MPZL3Q6UWV2 235 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 HS6ST3Q8IZP7 471 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 RNF149Q8NC42 400 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 RXFP2Q8WXD0 754 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 CFAP36Q96G28 342 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 CDHR1Q96JP9 859 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 PKP2Q99959 881 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 OSBPL10Q9BXB5 764 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 NAA50Q9GZZ1 169 aaKnown RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 TMA7Q9Y2S6 64 aaKnown RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 CROCCQ5TZA2 2017 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 C7orf72A4D263 438 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 I3L4J1 428 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 COPEO14579 308 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 DENRO43583 198 aaKnown RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 SIN3BO75182 1162 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 TNFAIP8O95379 198 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 ZBTB11O95625 1053 aaPredicted RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 CD53P19397 219 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 NCF2P19878 526 aaPredicted RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 STAT5BP51692 787 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 GBE1Q04446 702 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 CDK18Q07002 472 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 DCDC5Q6ZRR9 648 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 CENPSQ8N2Z9 138 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 PPM1NQ8N819 430 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 DNERQ8NFT8 737 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 ZSCAN18Q8TBC5 510 aaPredicted RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 TMEM176AQ96HP8 235 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 HNRNPABQ99729 332 aaKnown RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 CALN1Q9BXU9 219 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 RSAD1Q9HA92 442 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 AASDHPPTQ9NRN7 309 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 RAB6BQ9NRW1 208 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 PNPOQ9NVS9 261 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 FAM32AQ9Y421 112 aaKnown RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 IQANK1A0A1B0GTG1 560 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 DPYSL4O14531 572 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 DCXO43602 365 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 ATE1O95260 518 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 APOEP02649 317 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 FAM58BPP0C7Q3 252 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 OCM2P0CE71 109 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 OCMP0CE72 109 aaPredicted RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 XRCC1P18887 633 aaPredicted RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 CRHR1P34998 444 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 PHKA2P46019 1235 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 TMED10P49755 219 aaKnown RBP8.56□□□□□ -1.04
VAPB-205ENST00000476395 CSRP3P50461 194 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 COPAP53621 1224 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 CDH6P55285 790 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 PCLAFQ15004 111 aa8.56□□□□□ -1.04
VAPB-205ENST00000476395 STXBP2Q15833 593 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms