RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 LRMPQ12912 555 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 ELOAQ14241 798 aaKnown RBP10.82□□□□□ -0.68
CALD1-217ENST00000475772 TEAD4Q15561 434 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 DBN1Q16643 649 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 C9orf64Q5T6V5 341 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 LCLAT1Q6UWP7 414 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 GATAD2AQ86YP4 633 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 VWA5B2Q8N398 1253 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 GALNT15Q8N3T1 639 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 LMO3Q8TAP4 145 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 KAT5Q92993 513 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 SLC35C1Q96A29 364 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 CCDC47Q96A33 483 aaKnown RBP10.82□□□□□ -0.68
CALD1-217ENST00000475772 AZIN2Q96A70 460 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 SLC39A13Q96H72 371 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 LRIG1Q96JA1 1093 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 FCRL2Q96LA5 508 aaPredicted RBP10.82□□□□□ -0.68
CALD1-217ENST00000475772 SLC6A18Q96N87 628 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 IPO9Q96P70 1041 aaKnown RBP10.82□□□□□ -0.68
CALD1-217ENST00000475772 DNAI2Q9GZS0 605 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 TSPAN10Q9H1Z9 355 aaPredicted RBP10.82□□□□□ -0.68
CALD1-217ENST00000475772 PABPC3Q9H361 631 aaKnown RBP10.82□□□□□ -0.68
CALD1-217ENST00000475772 FBRSQ9HAH7 460 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 STIM2Q9P246 746 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 HESX1Q9UBX0 185 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 XPO7Q9UIA9 1087 aaKnown RBP10.82□□□□□ -0.68
CALD1-217ENST00000475772 GCN1Q92616 2671 aaKnown RBP10.82□□□□□ -0.68
CALD1-217ENST00000475772 HELZ2Q9BYK8 2649 aaKnown RBP10.82□□□□□ -0.68
CALD1-217ENST00000475772 A0A1W2PP55 124 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 TRIM49BA6NDI0 452 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 TTC34A8MYJ7 566 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 MID1O15344 667 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 SETSIPP0DME0 302 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 CSKP41240 450 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 GRK6P43250 576 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 KRT85P78386 507 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 PNOCQ13519 176 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 CNGA2Q16280 664 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 HNRNPA1L2Q32P51 320 aaKnown RBP10.81□□□□□ -0.68
CALD1-217ENST00000475772 TBCELQ5QJ74 424 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 ZNF776Q68DI1 518 aaPredicted RBP10.81□□□□□ -0.68
CALD1-217ENST00000475772 NCEH1Q6PIU2 408 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 USP30Q70CQ3 517 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 HSCBQ8IWL3 235 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 UNC45BQ8IWX7 931 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 DHX40Q8IX18 779 aaKnown RBP10.81□□□□□ -0.68
CALD1-217ENST00000475772 ZDHHC1Q8WTX9 485 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 GOLGA1Q92805 767 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 PTPRN2Q92932 1015 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 NUCKS1Q9H1E3 243 aaKnown RBP10.81□□□□□ -0.68
CALD1-217ENST00000475772 FBXL12Q9NXK8 326 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 SLCO3A1Q9UIG8 710 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 KIAA1257Q9ULG3 409 aa10.81□□□□□ -0.68
CALD1-217ENST00000475772 MGAQ8IWI9 3026 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 FAM47DPA6NHR8 397 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 PLK4O00444 970 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 IRAK2O43187 625 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 STX10O60499 249 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 LTFP02788 710 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 BRD2P25440 801 aaKnown RBP10.8□□□□□ -0.68
CALD1-217ENST00000475772 MSX1P28360 303 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 GMPRP36959 345 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 RPL34P49207 117 aaKnown RBP10.8□□□□□ -0.68
CALD1-217ENST00000475772 TBX4P57082 545 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 BNIP3Q12983 259 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 DNAJC3Q13217 504 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 EIF4EBP2Q13542 120 aaPredicted RBP10.8□□□□□ -0.68
CALD1-217ENST00000475772 COBLL1Q53SF7 1204 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 DCAF17Q5H9S7 520 aaPredicted RBP10.8□□□□□ -0.68
CALD1-217ENST00000475772 MS4A13Q5J8X5 152 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 TCERG1LQ5VWI1 586 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 TMEM270Q6UE05 265 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 RIPOR1Q6ZS17 1223 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 MMAAQ8IVH4 418 aaKnown RBP10.8□□□□□ -0.68
CALD1-217ENST00000475772 MFN1Q8IWA4 741 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 APCDD1Q8J025 514 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 SIX6OS1Q8N1H7 587 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 CFAP52Q8N1V2 620 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 AADATQ8N5Z0 425 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 SAP25Q8TEE9 199 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 IRGQQ8WZA9 623 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 ERCC4Q92889 916 aaPredicted RBP10.8□□□□□ -0.68
CALD1-217ENST00000475772 HSFY1Q96LI6 401 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 ELF4Q99607 663 aaPredicted RBP10.8□□□□□ -0.68
CALD1-217ENST00000475772 ADAMTS1Q9UHI8 967 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 SCML1Q9UN30 329 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 NOVA2Q9UNW9 492 aaKnown RBP10.8□□□□□ -0.68
CALD1-217ENST00000475772 ERVW-1Q9UQF0 538 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 NAALADL1Q9UQQ1 740 aa10.8□□□□□ -0.68
CALD1-217ENST00000475772 TARSL2A2RTX5 802 aaKnown RBP10.79□□□□□ -0.68
CALD1-217ENST00000475772 CDC14CA4D256 554 aa10.79□□□□□ -0.68
CALD1-217ENST00000475772 SLC16A3O15427 465 aaKnown RBP10.79□□□□□ -0.68
CALD1-217ENST00000475772 TLX3O43711 291 aaPredicted RBP10.79□□□□□ -0.68
CALD1-217ENST00000475772 DFNA5O60443 496 aa10.79□□□□□ -0.68
CALD1-217ENST00000475772 HSP90AA1P07900 732 aaKnown RBP10.79□□□□□ -0.68
CALD1-217ENST00000475772 THBS1P07996 1170 aa10.79□□□□□ -0.68
CALD1-217ENST00000475772 PAEPP09466 180 aa10.79□□□□□ -0.68
CALD1-217ENST00000475772 ITPKBP27987 946 aa10.79□□□□□ -0.68
CALD1-217ENST00000475772 SLC8A1P32418 973 aa10.79□□□□□ -0.68
CALD1-217ENST00000475772 NOS2P35228 1153 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms