RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 GLDCP23378 1020 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 PDK1Q15118 436 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 PRKD1Q15139 912 aaPredicted RBP18.53■□□□□ 0.56
ATG4B-217ENST00000475693 TUBB8Q3ZCM7 444 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 TRIM68Q6AZZ1 485 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 ZDHHC24Q6UX98 284 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 OR7D4Q8NG98 312 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 FBXO25Q8TCJ0 367 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 HTR3CQ8WXA8 447 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 ZFYVE19Q96K21 471 aa18.53■□□□□ 0.56
ATG4B-217ENST00000475693 NYNRINQ9P2P1 1898 aaKnown RBP18.52■□□□□ 0.56
ATG4B-217ENST00000475693 TCRBV7S3A2A0A539 114 aa18.52■□□□□ 0.56
ATG4B-217ENST00000475693 BCLAF3A2AJT9 711 aaKnown RBP18.52■□□□□ 0.56
ATG4B-217ENST00000475693 FGF19O95750 216 aa18.52■□□□□ 0.56
ATG4B-217ENST00000475693 TNFRSF8P28908 595 aa18.52■□□□□ 0.56
ATG4B-217ENST00000475693 WASHC5Q12768 1159 aa18.52■□□□□ 0.56
ATG4B-217ENST00000475693 ZBTB17Q13105 803 aa18.52■□□□□ 0.56
ATG4B-217ENST00000475693 HEATR6Q6AI08 1181 aaKnown RBP18.52■□□□□ 0.56
ATG4B-217ENST00000475693 TMEM25Q86YD3 366 aa18.52■□□□□ 0.56
ATG4B-217ENST00000475693 CARNMT1Q8N4J0 409 aa18.52■□□□□ 0.56
ATG4B-217ENST00000475693 LEMD2Q8NC56 503 aa18.52■□□□□ 0.56
ATG4B-217ENST00000475693 TMA16Q96EY4 203 aaKnown RBP18.52■□□□□ 0.56
ATG4B-217ENST00000475693 S1PR5Q9H228 398 aa18.52■□□□□ 0.56
ATG4B-217ENST00000475693 DZANK1Q9NVP4 752 aa18.52■□□□□ 0.56
ATG4B-217ENST00000475693 STOML2Q9UJZ1 356 aa18.52■□□□□ 0.56
ATG4B-217ENST00000475693 LSM7Q9UK45 103 aaKnown RBP18.52■□□□□ 0.56
ATG4B-217ENST00000475693 RASA4BC9J798 803 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 H3BQ06 376 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-217ENST00000475693 RASA4O43374 803 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 ZNF135P52742 658 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-217ENST00000475693 ITGA8P53708 1063 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 ANKRD22Q5VYY1 191 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 AFMIDQ63HM1 303 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 TDRD5Q8NAT2 981 aaKnown RBP18.51■□□□□ 0.55
ATG4B-217ENST00000475693 DDI1Q8WTU0 396 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 PPM1EQ8WY54 764 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 SEC14L1Q92503 715 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 AZIN2Q96A70 460 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 FRMD8P1Q9BZ68 369 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-217ENST00000475693 RAB17Q9H0T7 212 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 GOLGA8MH3BSY2 632 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 AGPSO00116 658 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 RNF103O00237 685 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 MAFKO60675 156 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 METTL18O95568 372 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 SERPINB6P35237 376 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 XRCC4Q13426 336 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 C5orf22Q49AR2 442 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 CDKL3Q8IVW4 592 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-217ENST00000475693 FAM76AQ8TAV0 307 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 AGAP3Q96P47 875 aa18.51■□□□□ 0.55
ATG4B-217ENST00000475693 GOLGA6BA6NDN3 693 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 WASH4PA8MWX3 477 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 JCHAINP01591 159 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 DDX6P26196 483 aaKnown RBP eCLIP18.5■□□□□ 0.55
ATG4B-217ENST00000475693 LMNB2Q03252 620 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 PPIDQ08752 370 aaKnown RBP18.5■□□□□ 0.55
ATG4B-217ENST00000475693 POLD3Q15054 466 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-217ENST00000475693 ZNF77Q15935 545 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 CTC1Q2NKJ3 1217 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 DNAJC21Q5F1R6 531 aaKnown RBP18.5■□□□□ 0.55
ATG4B-217ENST00000475693 RABGAP1LQ5R372 815 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 UMODL1-AS1Q8N2C9 162 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 ATPAF2Q8N5M1 289 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 RUNDC3BQ96NL0 473 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 ZDHHC18Q9NUE0 388 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 TTC24A2A3L6 582 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-217ENST00000475693 GFRA2O00451 464 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 PPP1R12AO14974 1030 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-217ENST00000475693 TRIM24O15164 1050 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 POU2F2P09086 479 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 MZF1P28698 734 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-217ENST00000475693 STIP1P31948 543 aaKnown RBP18.5■□□□□ 0.55
ATG4B-217ENST00000475693 UBAP2Q5T6F2 1119 aaKnown RBP18.5■□□□□ 0.55
ATG4B-217ENST00000475693 IZUMO3Q5VZ72 239 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 EMBQ6PCB8 327 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 ZNF567Q8N184 647 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 ASIC4Q96FT7 647 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 MYADMQ96S97 322 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 SH3GL2Q99962 352 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 SPON2Q9BUD6 331 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 PCDH9Q9HC56 1237 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 RSPH14Q9UHP6 348 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 TTLL3Q9Y4R7 772 aa18.5■□□□□ 0.55
ATG4B-217ENST00000475693 CLUHO75153 1309 aa18.49■□□□□ 0.55
ATG4B-217ENST00000475693 GOLGA8KD6RF30 607 aa18.49■□□□□ 0.55
ATG4B-217ENST00000475693 RAMP2O60895 175 aa18.49■□□□□ 0.55
ATG4B-217ENST00000475693 PTPN3P26045 913 aa18.49■□□□□ 0.55
ATG4B-217ENST00000475693 HTR7P34969 479 aa18.49■□□□□ 0.55
ATG4B-217ENST00000475693 CHKAP35790 457 aa18.49■□□□□ 0.55
ATG4B-217ENST00000475693 CDH4P55283 916 aa18.49■□□□□ 0.55
ATG4B-217ENST00000475693 BASP1P80723 227 aaKnown RBP18.49■□□□□ 0.55
ATG4B-217ENST00000475693 OLIG2Q13516 323 aa18.49■□□□□ 0.55
ATG4B-217ENST00000475693 ANKRD20A2Q5SQ80 823 aa18.49■□□□□ 0.55
ATG4B-217ENST00000475693 ANKRD20A1Q5TYW2 823 aa18.49■□□□□ 0.55
ATG4B-217ENST00000475693 ANKRD20A3Q5VUR7 823 aa18.49■□□□□ 0.55
ATG4B-217ENST00000475693 CXorf57Q6NSI4 855 aaKnown RBP18.49■□□□□ 0.55
ATG4B-217ENST00000475693 FOXR1Q6PIV2 292 aa18.49■□□□□ 0.55
ATG4B-217ENST00000475693 BZW1Q7L1Q6 419 aaKnown RBP18.49■□□□□ 0.55
ATG4B-217ENST00000475693 HDAC11Q96DB2 347 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms