RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 PBLDP30039 288 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 SHMT1P34896 483 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 ATP5OP48047 213 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 PIP4K2AP48426 406 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 VCPP55072 806 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 OTUD4Q01804 1114 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 POU4F1Q01851 419 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 GFPT1Q06210 699 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 PAK1Q13153 545 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 HNRNPDQ14103 355 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 MORC3Q14149 939 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 GBX1Q14549 363 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 C16orf72Q14CZ0 275 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 TXNRD1Q16881 649 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 ADCK5Q3MIX3 580 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 WDR72Q3MJ13 1102 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 TBRG1Q3YBR2 411 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 FAM209BQ5JX69 171 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 TCHHL1Q5QJ38 904 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 FDX2Q6P4F2 183 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 DCLRE1AQ6PJP8 1040 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 APOA5Q6Q788 366 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 TMC5Q6UXY8 1006 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 LBX2Q6XYB7 198 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 RBM44Q6ZP01 1051 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 SLFN11Q7Z7L1 901 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 UNC5CLQ8IV45 518 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 TC2NQ8N9U0 490 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 SPATA5Q8NB90 893 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 PCSK9Q8NBP7 692 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 MGARPQ8TDB4 240 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 GANCQ8TET4 914 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 SLC44A1Q8WWI5 657 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 DDX17Q92841 729 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 SLC5A5Q92911 643 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 SERPINB12Q96P63 405 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 CINPQ9BW66 212 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 OR2B2Q9GZK3 357 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 RNF41Q9H4P4 317 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 SIAEQ9HAT2 523 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 KIAA1586Q9HCI6 787 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 S100A14Q9HCY8 104 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 IL1RAPL2Q9NP60 686 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 MAN1C1Q9NR34 630 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 GPR27Q9NS67 375 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 CHST7Q9NS84 486 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 IARS2Q9NSE4 1012 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 ASNSD1Q9NWL6 643 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 ZNF624Q9P2J8 865 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 HECAQ9UBI9 543 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 EXTL2Q9UBQ6 330 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 PADI4Q9UM07 663 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 AGTPBP1Q9UPW5 1226 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 MED16Q9Y2X0 877 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 ARL2BPQ9Y2Y0 163 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 CAB39Q9Y376 341 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 DAGLAQ9Y4D2 1042 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 A0A1W2PP64 1363 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 ARHGEF37A1IGU5 675 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 A6NCN8 305 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 C2orf71A6NGG8 1288 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 PCP4L1A6NKN8 68 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 ATP6V1G2-DDX39BF2Z307 99 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 MTSS1O43312 755 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 SNX3O60493 162 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 CTNND1O60716 968 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 DCTN3O75935 186 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 TGFB1P01137 390 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 ATP5BP06576 529 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 CYP3A4P08684 503 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 KRT3P12035 628 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 CKBP12277 381 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 CTNNA2P26232 953 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 GJB2P29033 226 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 NOS3P29474 1203 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 RRM2P31350 389 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 CTNNA1P35221 906 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 RCVRNP35243 200 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 SOX6P35712 828 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 CTSKP43235 329 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 DNM2P50570 870 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 RAP1GDS1P52306 607 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 CDR2Q01850 454 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 MYL5Q02045 173 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 ASPHQ12797 758 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 ACVR2BQ13705 512 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 GTF2H3Q13889 308 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 SLC14A2Q15849 920 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 ZC2HC1CQ53FD0 456 aaPredicted RBP6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 TDRD12Q587J7 1177 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 FAM205BPQ63HN1 556 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 RNF43Q68DV7 783 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 CRTC3Q6UUV7 619 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 TAS2R42Q7RTR8 314 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 OVCH1Q7RTY7 1134 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 SATL1Q86VE3 508 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 CMIPQ8IY22 773 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 GSPT2Q8IYD1 628 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 KIAA2013Q8IYS2 634 aa6.12□□□□□ -1.43
ECHDC1-215ENST00000475319 CMTR2Q8IYT2 770 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms