RNA–Protein interactions for RNA: ENST00000474528.5

SFXN5-211, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 4,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-211ENST00000474528 ACOT9Q9Y305 439 aa11.9□□□□□ -0.5
SFXN5-211ENST00000474528 TRIM17Q9Y577 477 aa11.9□□□□□ -0.5
SFXN5-211ENST00000474528 MCM3APO60318 1980 aa11.9□□□□□ -0.5
SFXN5-211ENST00000474528 RAMP2O60895 175 aa11.9□□□□□ -0.5
SFXN5-211ENST00000474528 SUPT7LO94864 414 aa11.9□□□□□ -0.5
SFXN5-211ENST00000474528 ALADP13716 330 aa11.9□□□□□ -0.5
SFXN5-211ENST00000474528 RPL17P18621 184 aaKnown RBP11.9□□□□□ -0.5
SFXN5-211ENST00000474528 SP100P23497 879 aaPredicted RBP11.9□□□□□ -0.5
SFXN5-211ENST00000474528 DUSP4Q13115 394 aa11.9□□□□□ -0.5
SFXN5-211ENST00000474528 LDB1Q86U70 411 aaPredicted RBP11.9□□□□□ -0.5
SFXN5-211ENST00000474528 LGI2Q8N0V4 545 aa11.9□□□□□ -0.5
SFXN5-211ENST00000474528 STK32AQ8WU08 396 aa11.9□□□□□ -0.5
SFXN5-211ENST00000474528 KBTBD7Q8WVZ9 684 aa11.9□□□□□ -0.5
SFXN5-211ENST00000474528 SGIP1Q9BQI5 828 aa11.9□□□□□ -0.5
SFXN5-211ENST00000474528 ABCC13Q9NSE7 274 aa11.9□□□□□ -0.5
SFXN5-211ENST00000474528 GTF2IRD1Q9UHL9 959 aa11.9□□□□□ -0.5
SFXN5-211ENST00000474528 A8MX80 341 aa11.9□□□□□ -0.51
SFXN5-211ENST00000474528 F8W810 466 aa11.9□□□□□ -0.51
SFXN5-211ENST00000474528 NCAM2O15394 837 aa11.9□□□□□ -0.51
SFXN5-211ENST00000474528 DCXO43602 365 aa11.9□□□□□ -0.51
SFXN5-211ENST00000474528 UNC5CO95185 931 aa11.9□□□□□ -0.51
SFXN5-211ENST00000474528 INHBEP58166 350 aa11.9□□□□□ -0.51
SFXN5-211ENST00000474528 PCBP1Q15365 356 aaKnown RBP eCLIP11.9□□□□□ -0.51
SFXN5-211ENST00000474528 PIGWQ7Z7B1 504 aa11.9□□□□□ -0.51
SFXN5-211ENST00000474528 CCNJLQ8IV13 435 aa11.9□□□□□ -0.51
SFXN5-211ENST00000474528 C10orf107Q8IVU9 208 aa11.9□□□□□ -0.51
SFXN5-211ENST00000474528 UTP6Q9NYH9 597 aaKnown RBP11.9□□□□□ -0.51
SFXN5-211ENST00000474528 F5H5T6 163 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 PIRO00625 290 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 SEPT4O43236 478 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 TIMM44O43615 452 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 PDE5AO76074 875 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 PDAP1Q13442 181 aaKnown RBP11.89□□□□□ -0.51
SFXN5-211ENST00000474528 UBAP2LQ14157 1087 aaKnown RBP11.89□□□□□ -0.51
SFXN5-211ENST00000474528 TBL1YQ9BQ87 522 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 OSBPL1AQ9BXW6 950 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 SENP6Q9GZR1 1112 aaPredicted RBP11.89□□□□□ -0.51
SFXN5-211ENST00000474528 HMX1Q9NP08 348 aaPredicted RBP11.89□□□□□ -0.51
SFXN5-211ENST00000474528 NDFIP2Q9NV92 336 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 SRRM3A6NNA2 597 aaPredicted RBP11.89□□□□□ -0.51
SFXN5-211ENST00000474528 PTGESO14684 152 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 PFKMP08237 780 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 ZNF865P0CJ78 1059 aaPredicted RBP11.89□□□□□ -0.51
SFXN5-211ENST00000474528 VAV1P15498 845 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 CHRNA4P43681 627 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 GPR15P49685 360 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 INTS6LQ5JSJ4 861 aaKnown RBP11.89□□□□□ -0.51
SFXN5-211ENST00000474528 MAMDC4Q6UXC1 1216 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 SPATA24Q86W54 205 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 CDC26Q8NHZ8 85 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 DCAKDQ8WVC6 231 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 TMEM169Q96HH4 297 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 SERPINB11Q96P15 392 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 NUF2Q9BZD4 464 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 ILKAPQ9H0C8 392 aaPredicted RBP11.89□□□□□ -0.51
SFXN5-211ENST00000474528 GPAMQ9HCL2 828 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 PNPOQ9NVS9 261 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 GMIPQ9P107 970 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 PTCH2Q9Y6C5 1203 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 PHIPQ8WWQ0 1821 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 SSC5DA1L4H1 1573 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 PFDN6O15212 129 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 NDUFS3O75489 264 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 WARSP23381 471 aaKnown RBP11.89□□□□□ -0.51
SFXN5-211ENST00000474528 RPL9P32969 192 aaKnown RBP11.89□□□□□ -0.51
SFXN5-211ENST00000474528 POLD3Q15054 466 aaPredicted RBP11.89□□□□□ -0.51
SFXN5-211ENST00000474528 ZRANB3Q5FWF4 1079 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 VWA5B1Q5TIE3 1220 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 KCTD4Q8WVF5 259 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 TRIB2Q92519 343 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 EMID1Q96A84 441 aaPredicted RBP11.89□□□□□ -0.51
SFXN5-211ENST00000474528 NMUR2Q9GZQ4 415 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 SNX15Q9NRS6 342 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 ARL8BQ9NVJ2 186 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 TMEM51Q9NW97 253 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 CHKBQ9Y259 395 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 ATP11BQ9Y2G3 1177 aa11.89□□□□□ -0.51
SFXN5-211ENST00000474528 DOCK5Q9H7D0 1870 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 PRPF4O43172 522 aaKnown RBP eCLIP11.88□□□□□ -0.511e-6■■■■□ 19.3
SFXN5-211ENST00000474528 PTPN3P26045 913 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 PTPN4P29074 926 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 ALDH1A3P47895 512 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 CDK16Q00536 496 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 GRIK3Q13003 919 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 XRCC4Q13426 336 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 USP29Q9HBJ7 922 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 H0Y626 953 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 DNAJC8O75937 253 aaPredicted RBP11.88□□□□□ -0.51
SFXN5-211ENST00000474528 CCND1P24385 295 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 GABRB2P47870 512 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 NUDT2P50583 147 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 TAF10Q12962 218 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 ZNF460Q14592 562 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 KCNJ11Q14654 390 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 TEX44Q53QW1 395 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 RASAL3Q86YV0 1011 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 CARNMT1Q8N4J0 409 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 UBR7Q8N806 425 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 NMRAL1Q9HBL8 299 aa11.88□□□□□ -0.51
SFXN5-211ENST00000474528 TRHDEQ9UKU6 1024 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms