RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 KCND3Q9UK17 655 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 LZTS1Q9Y250 596 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 TRBV5-3A0A0A0MS03 114 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 RHODO00212 210 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 UGDHO60701 494 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 PRPH2P23942 346 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 CIITAP33076 1130 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 PPM1FP49593 454 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 PRKAA2P54646 552 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 TBL3Q12788 808 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 RBMS2Q15434 407 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 PLK5Q496M5 336 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 C5orf22Q49AR2 442 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 MIDNQ504T8 468 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 NCAPH2Q6IBW4 605 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 RTL10Q7L3V2 364 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 PIM3Q86V86 326 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 TMEM200AQ86VY9 491 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 ZNF354CQ86Y25 554 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 SMAP1Q8IYB5 467 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 EXD3Q8N9H8 876 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 CLEC4CQ8WTT0 213 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 PPM1EQ8WY54 764 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 NCSTNQ92542 709 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 PPP1R10Q96QC0 940 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 IFT27Q9BW83 186 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 SCNM1Q9BWG6 230 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 CADM1Q9BY67 442 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 FZD3Q9NPG1 666 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 THSD1Q9NS62 852 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 POT1Q9NUX5 634 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 ZNF580Q9UK33 172 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 LAMP3Q9UQV4 416 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 SLC4A4Q9Y6R1 1079 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 DGKBQ9Y6T7 804 aa3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 ARID4BQ4LE39 1312 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-213ENST00000474240 CCDC196A0A1B0GTZ2 297 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 FOXO6A8MYZ6 492 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 HBP1O60381 514 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 KRT38O76015 456 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 KLKB1P03952 638 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 CNPP09543 421 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 MYZAPP0CAP1 466 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 CYP2J2P51589 502 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 RHAGQ02094 409 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 MTX1Q13505 466 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 CUL4BQ13620 913 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 KLF9Q13886 244 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 PGM5Q15124 567 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 ETFDHQ16134 617 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 TAF12Q16514 161 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 C6orf10Q5SRN2 563 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 FAM171A1Q5VUB5 890 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 KDELC2Q7Z4H8 507 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 SCN4BQ8IWT1 228 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 EXOC8Q8IYI6 725 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 MMP21Q8N119 569 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 DPP10Q8N608 796 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 CEP70Q8NHQ1 597 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 FCRL4Q96PJ5 515 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 TEFMQ96QE5 360 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 ACTR5Q9H9F9 607 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 CHODLQ9H9P2 273 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 PLEKHA2Q9HB19 425 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 MLXIPLQ9NP71 852 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 TMEM184CQ9NVA4 438 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 ARL15Q9NXU5 204 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 FEM1BQ9UK73 627 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 GDAQ9Y2T3 454 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 PCDHGB3Q9Y5G1 929 aa3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 TTBK1Q5TCY1 1321 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-213ENST00000474240 LY6G6EA0A0G2JKS1 128 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 NPIPB13A6NJU9 1138 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 NPIPB5A8MRT5 1133 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 NPIPB4C9JG80 1138 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 ANP32CO43423 234 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 STRNO43815 780 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 PIP5K1CO60331 668 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 GUCY1B2O75343 617 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 SYF2O95926 243 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 HOXD9P28356 352 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 SLC16A2P36021 539 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 SKIV2L2P42285 1042 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 GPD2P43304 727 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 VAMP2P63027 116 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 PMPCAQ10713 525 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 PDCLQ13371 301 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 SEMA3AQ14563 771 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 INPP5JQ15735 1006 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 TMEM95Q3KNT9 176 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 CBWD5Q5RIA9 395 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 PIK3CD-AS1Q5SR53 167 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 MANEAQ5SRI9 462 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 MAP3K21Q5TCX8 1036 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 AAGABQ6PD74 315 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 SLC30A9Q6PML9 568 aa3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-213ENST00000474240 CAMK1DQ8IU85 385 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms