RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 LRRC31Q6UY01 552 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 TFAP2DQ7Z6R9 452 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 MMAAQ8IVH4 418 aaKnown RBP18.43■□□□□ 0.54
UPF3A-203ENST00000474056 ZCCHC9Q8N567 271 aaKnown RBP18.43■□□□□ 0.54
UPF3A-203ENST00000474056 C3orf20Q8ND61 904 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 FRS2Q8WU20 508 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 FAM129BQ96TA1 746 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 SYT11Q9BT88 431 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 SELENOOQ9BVL4 669 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 BTBD1Q9H0C5 482 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 MUC3BQ9H195 1237 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 SERGEFQ9UGK8 458 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 SUSD2Q9UGT4 822 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 SLC25A13Q9UJS0 675 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 MYO6Q9UM54 1294 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 A0A1W2PP55 124 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 A0A1W2PQC6 194 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 TCRBV5S1A1TA0A578 114 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 RNASEH1O60930 286 aaKnown RBP18.42■□□□□ 0.54
UPF3A-203ENST00000474056 SRGAP2O75044 1071 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 SEMA4FO95754 770 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 CCDC172P0C7W6 258 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 RFC1P35251 1148 aaPredicted RBP18.42■□□□□ 0.54
UPF3A-203ENST00000474056 NNMTP40261 264 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 GFPT1Q06210 699 aaPredicted RBP18.42■□□□□ 0.54
UPF3A-203ENST00000474056 C1QBPQ07021 282 aaKnown RBP18.42■□□□□ 0.54
UPF3A-203ENST00000474056 CST6Q15828 149 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 ACBD5Q5T8D3 534 aaPredicted RBP18.42■□□□□ 0.54
UPF3A-203ENST00000474056 WDR59Q6PJI9 974 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 LUZP1Q86V48 1076 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 FAM172AQ8WUF8 416 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 SNX19Q92543 992 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 PPP1R9BQ96SB3 815 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 PSMB7Q99436 277 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 GTPBP2Q9BX10 602 aaKnown RBP18.42■□□□□ 0.54
UPF3A-203ENST00000474056 MIR1-1HGQ9H1L0 117 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 TAS2R14Q9NYV8 317 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 EIF2B4Q9UI10 523 aaKnown RBP18.42■□□□□ 0.54
UPF3A-203ENST00000474056 SCML1Q9UN30 329 aa18.42■□□□□ 0.54
UPF3A-203ENST00000474056 SNAP91O60641 907 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 SERPINC1P01008 464 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 GNSP15586 552 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 GPD1P21695 349 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 PSMD8P48556 350 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 VASPP50552 380 aaPredicted RBP18.41■□□□□ 0.54
UPF3A-203ENST00000474056 HDAC4P56524 1084 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 E4F1Q66K89 784 aaPredicted RBP18.41■□□□□ 0.54
UPF3A-203ENST00000474056 USP30Q70CQ3 517 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 STRADAQ7RTN6 431 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 SETD3Q86TU7 594 aaPredicted RBP18.41■□□□□ 0.54
UPF3A-203ENST00000474056 SH2D3CQ8N5H7 860 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 OR2I1PQ8NGU4 316 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 GANCQ8TET4 914 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 CENPIQ92674 756 aaPredicted RBP18.41■□□□□ 0.54
UPF3A-203ENST00000474056 MAGEB5Q9BZ81 275 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 TTYH3Q9C0H2 523 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 PCED1AQ9H1Q7 454 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 SGK2Q9HBY8 427 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 FBXL12Q9NXK8 326 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 ZNF212Q9UDV6 495 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 VPS51Q9UID3 782 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 SLCO1B1Q9Y6L6 691 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 CABIN1Q9Y6J0 2220 aa18.41■□□□□ 0.54
UPF3A-203ENST00000474056 A0A0D9SEW6 157 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 A0A1B0GTW7 788 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 SIGLEC16A6NMB1 481 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 ARHGAP33O14559 1287 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 CCP110O43303 1012 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 ATP9BO43861 1147 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 KCNK5O95279 499 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 ADRB1P08588 477 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 TNFAIP3P21580 790 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 SLC8A1P32418 973 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 ADRA1BP35368 520 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 ATXN3P54252 364 aaPredicted RBP18.4■□□□□ 0.54
UPF3A-203ENST00000474056 ELAVL3Q14576 367 aaKnown RBP18.4■□□□□ 0.54
UPF3A-203ENST00000474056 NR1I3Q14994 352 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 ARL13BQ3SXY8 428 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 ACCSLQ4AC99 568 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 ACAD10Q6JQN1 1059 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 DNAJC24Q6P3W2 148 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 MCOLN2Q8IZK6 566 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 AADATQ8N5Z0 425 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 CCDC185Q8N715 623 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 OR7D4Q8NG98 312 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 MCEEQ96PE7 176 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 ZYG11BQ9C0D3 744 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 HAUS4Q9H6D7 363 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 NCKAP1Q9Y2A7 1128 aa18.4■□□□□ 0.54
UPF3A-203ENST00000474056 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.4■□□□□ 0.54
UPF3A-203ENST00000474056 TMCO5BA8MYB1 307 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 FAM72CH0Y354 149 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 BCAT2O15382 392 aaPredicted RBP18.39■□□□□ 0.53
UPF3A-203ENST00000474056 FSBPO95073 299 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 MT-CO1P00395 513 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 SYPP08247 313 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 SRCP12931 536 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 GLDCP23378 1020 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 RRM1P23921 792 aa18.39■□□□□ 0.53
UPF3A-203ENST00000474056 OR1E1P30953 314 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms