RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 TNNT1P13805 278 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 COL9A1P20849 921 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 HOXC13P31276 330 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 CTSOP43234 321 aaPredicted RBP12.73□□□□□ -0.37
DDX56-209ENST00000473924 CDH6P55285 790 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 TAS2R40P59535 323 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 GNA12Q03113 381 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 POLD3Q15054 466 aaPredicted RBP12.73□□□□□ -0.37
DDX56-209ENST00000473924 PTPRNQ16849 979 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 ZNF528Q3MIS6 628 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 ODF2Q5BJF6 829 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 HEATR6Q6AI08 1181 aaKnown RBP12.73□□□□□ -0.37
DDX56-209ENST00000473924 TMEM92Q6UXU6 159 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 PGBD3Q8N328 593 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 KCTD6Q8NC69 237 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 OR7D4Q8NG98 312 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 ALG14Q96F25 216 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 CALR3Q96L12 384 aaKnown RBP12.73□□□□□ -0.37
DDX56-209ENST00000473924 RPL10LQ96L21 214 aaKnown RBP12.73□□□□□ -0.37
DDX56-209ENST00000473924 GABRG3Q99928 467 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 MAGEH1Q9H213 219 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 ATP13A1Q9HD20 1204 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 NDFIP2Q9NV92 336 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 CWC15Q9P013 229 aaKnown RBP12.73□□□□□ -0.37
DDX56-209ENST00000473924 BCCIPQ9P287 314 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDX56-209ENST00000473924 ZNF212Q9UDV6 495 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 HPCAL4Q9UM19 191 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 ERVW-1Q9UQF0 538 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 OR51B4Q9Y5P0 310 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 RAD54BQ9Y620 910 aa12.73□□□□□ -0.37
DDX56-209ENST00000473924 BTNL10A8MVZ5 291 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 WASH4PA8MWX3 477 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 CBX4O00257 560 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 PJA2O43164 708 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 BUB1BO60566 1050 aaPredicted RBP12.72□□□□□ -0.37
DDX56-209ENST00000473924 HLA-EP13747 358 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 ERCC2P18074 760 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 COMTP21964 271 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 PRKCHP24723 683 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 HCAR3P49019 387 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 PXNP49023 591 aaPredicted RBP12.72□□□□□ -0.37
DDX56-209ENST00000473924 STK19P49842 368 aaPredicted RBP12.72□□□□□ -0.37
DDX56-209ENST00000473924 TCF15Q12870 199 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 ENPP2Q13822 863 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 IFI16Q16666 785 aaKnown RBP12.72□□□□□ -0.37
DDX56-209ENST00000473924 ATP13A4Q4VNC1 1196 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 ANO7Q6IWH7 933 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 POLNQ7Z5Q5 900 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 DAAM2Q86T65 1068 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 MAP7D3Q8IWC1 876 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 RHOT1Q8IXI2 618 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 ZNF366Q8N895 744 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 DCAF4L2Q8NA75 395 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 ATOH1Q92858 354 aaPredicted RBP12.72□□□□□ -0.37
DDX56-209ENST00000473924 CALN1Q9BXU9 219 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 FAM126AQ9BYI3 521 aaPredicted RBP12.72□□□□□ -0.37
DDX56-209ENST00000473924 LACRTQ9GZZ8 138 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 TMEM245Q9H330 911 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 PCDH18Q9HCL0 1135 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 KLHL11Q9NVR0 708 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 SUN2Q9UH99 717 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 HYOU1Q9Y4L1 999 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 ALG6Q9Y672 507 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 DUSP10Q9Y6W6 482 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 CACNA1IQ9P0X4 2223 aa12.72□□□□□ -0.37
DDX56-209ENST00000473924 MYO18AQ92614 2054 aaKnown RBP12.71□□□□□ -0.37
DDX56-209ENST00000473924 A0A1W2PQF6 199 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 MACROD2A1Z1Q3 448 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 SNAP91O60641 907 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 HOXA6P31267 233 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 ACVRL1P37023 503 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 FNTBP49356 437 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 YBEYP58557 167 aaPredicted RBP12.71□□□□□ -0.37
DDX56-209ENST00000473924 PDK2Q15119 407 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 ACCSLQ4AC99 568 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 RETSATQ6NUM9 610 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 C11orf63Q6NUN7 778 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 KIAA1211LQ6NV74 962 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 ZC3H14Q6PJT7 736 aaKnown RBP12.71□□□□□ -0.37
DDX56-209ENST00000473924 LONP2Q86WA8 852 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 ATP11CQ8NB49 1132 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 KDM1BQ8NB78 822 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 TPCN2Q8NHX9 752 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 HMGB4Q8WW32 186 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 ATRIPQ8WXE1 791 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 ARHGEF2Q92974 986 aaKnown RBP12.71□□□□□ -0.37
DDX56-209ENST00000473924 MRGPRX3Q96LB0 322 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 CSPG4P5Q96PW8 444 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 PSMB7Q99436 277 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 TSGA10Q9BZW7 698 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 GOLPH3Q9H4A6 298 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 RCOR3Q9P2K3 495 aaPredicted RBP12.71□□□□□ -0.37
DDX56-209ENST00000473924 VPS51Q9UID3 782 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 SLCO3A1Q9UIG8 710 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 SALL4Q9UJQ4 1053 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 ADGRG1Q9Y653 693 aa12.71□□□□□ -0.37
DDX56-209ENST00000473924 LRRD1A4D1F6 860 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 TTC34A8MYJ7 566 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 RASA4BC9J798 803 aa12.7□□□□□ -0.38
DDX56-209ENST00000473924 AXIN1O15169 862 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms