RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 MUC3BQ9H195 1237 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 ABHD10Q9NUJ1 306 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 FZD10Q9ULW2 581 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 SCINQ9Y6U3 715 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 LAMA1P25391 3075 aa19.44■□□□□ 0.7
PTCD3-210ENST00000473829 C7P10643 843 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 GLDCP23378 1020 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 PTGER3P43115 390 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 TPMTP51580 245 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 RPS14P62263 151 aaKnown RBP19.43■□□□□ 0.7
PTCD3-210ENST00000473829 GFPT1Q06210 699 aaPredicted RBP19.43■□□□□ 0.7
PTCD3-210ENST00000473829 BYSLQ13895 437 aaKnown RBP19.43■□□□□ 0.7
PTCD3-210ENST00000473829 ASTE1Q2TB18 679 aaPredicted RBP19.43■□□□□ 0.7
PTCD3-210ENST00000473829 EFHC2Q5JST6 749 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 C6orf118Q5T5N4 469 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 DAB2IPQ5VWQ8 1189 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 RWDD4Q6NW29 188 aaKnown RBP19.43■□□□□ 0.7
PTCD3-210ENST00000473829 ALKBH5Q6P6C2 394 aaKnown RBP19.43■□□□□ 0.7
PTCD3-210ENST00000473829 CYP4V2Q6ZWL3 525 aaPredicted RBP19.43■□□□□ 0.7
PTCD3-210ENST00000473829 ARMCX6Q7L4S7 300 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 METTL3Q86U44 580 aaKnown RBP19.43■□□□□ 0.7
PTCD3-210ENST00000473829 DRC7Q8IY82 874 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 DEFB119Q8N690 84 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 FNIP1Q8TF40 1166 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 TBC1D31Q96DN5 1066 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 TRIM5Q9C035 493 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 SMOC1Q9H4F8 434 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 ITM2CQ9NQX7 267 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 GPATCH2LQ9NWQ4 482 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 SUN2Q9UH99 717 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 VPS51Q9UID3 782 aa19.43■□□□□ 0.7
PTCD3-210ENST00000473829 MAP3K13O43283 966 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 MPLP40238 635 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 DHPSP49366 369 aaPredicted RBP19.42■□□□□ 0.7
PTCD3-210ENST00000473829 RPL6Q02878 288 aaKnown RBP19.42■□□□□ 0.7
PTCD3-210ENST00000473829 CREB5Q02930 508 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 SULT2A1Q06520 285 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 SEMA3BQ13214 749 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 CCDC122Q5T0U0 273 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 DCAF4L2Q8NA75 395 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 FRS2Q8WU20 508 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 PTPRN2Q92932 1015 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 CHP1Q99653 195 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 RSPH9Q9H1X1 276 aaPredicted RBP19.42■□□□□ 0.7
PTCD3-210ENST00000473829 MRPL47Q9HD33 250 aaKnown RBP19.42■□□□□ 0.7
PTCD3-210ENST00000473829 SEMA4GQ9NTN9 838 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 TMEM248Q9NWD8 314 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 USP18Q9UMW8 372 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 DCHS1Q96JQ0 3298 aa19.42■□□□□ 0.7
PTCD3-210ENST00000473829 EDDM13A0A1B0GTR0 161 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 ILVBLA1L0T0 632 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 BCLAF3A2AJT9 711 aaKnown RBP19.41■□□□□ 0.7
PTCD3-210ENST00000473829 LRCH4O75427 683 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 MT-CO1P00395 513 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 IGLV3-19P01714 112 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 CYP1A2P05177 515 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 RHOQP17081 205 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 L1CAMP32004 1257 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 GALCP54803 685 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 NUMA1Q14980 2115 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 CA9Q16790 459 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 PLA2G2CQ5R387 149 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 SLC36A4Q6YBV0 504 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 LPCAT2Q7L5N7 544 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 SLC41A1Q8IVJ1 513 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 BTBD6Q96KE9 485 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 PPP1R9BQ96SB3 815 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 SNRNP25Q9BV90 132 aaKnown RBP19.41■□□□□ 0.7
PTCD3-210ENST00000473829 PACSIN1Q9BY11 444 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 FBRSQ9HAH7 460 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 PCSK1NQ9UHG2 260 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 SLC25A13Q9UJS0 675 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 PCDHGA5Q9Y5G8 931 aa19.41■□□□□ 0.7
PTCD3-210ENST00000473829 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.41■□□□□ 0.7
PTCD3-210ENST00000473829 K7ERQ8 282 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 ATP9BO43861 1147 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 CREB3O43889 395 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 LRP3O75074 770 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 TPM1P09493 284 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 SRCP12931 536 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 TCF4P15884 667 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 DESP17661 470 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 CD6P30203 668 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 MIPP30301 263 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 VASPP50552 380 aaPredicted RBP19.4■□□□□ 0.7
PTCD3-210ENST00000473829 AIF1P55008 147 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 GNA12Q03113 381 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 SF3A2Q15428 464 aaKnown RBP19.4■□□□□ 0.7
PTCD3-210ENST00000473829 CSRP2Q16527 193 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 SLC18A3Q16572 532 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 ZNF776Q68DI1 518 aaPredicted RBP19.4■□□□□ 0.7
PTCD3-210ENST00000473829 LINGO4Q6UY18 593 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 ZNF783Q6ZMS7 281 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 FAM124AQ86V42 546 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 STK40Q8N2I9 435 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 SH2D3CQ8N5H7 860 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 TOE1Q96GM8 510 aaKnown RBP19.4■□□□□ 0.7
PTCD3-210ENST00000473829 FAM129BQ96TA1 746 aa19.4■□□□□ 0.7
PTCD3-210ENST00000473829 C2orf49Q9BVC5 232 aaPredicted RBP19.4■□□□□ 0.7
PTCD3-210ENST00000473829 NUP85Q9BW27 656 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms