RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 HTR3DQ70Z44 454 aa28.14■■■□□ 2.09
HOXB3-207ENST00000472863 IQCKQ8N0W5 287 aa28.14■■■□□ 2.09
HOXB3-207ENST00000472863 OR52K2Q8NGK3 314 aa28.14■■■□□ 2.09
HOXB3-207ENST00000472863 USP33Q8TEY7 942 aa28.14■■■□□ 2.09
HOXB3-207ENST00000472863 SMG7Q92540 1137 aaKnown RBP28.14■■■□□ 2.09
HOXB3-207ENST00000472863 MRPL38Q96DV4 380 aaKnown RBP28.14■■■□□ 2.09
HOXB3-207ENST00000472863 ZSWIM3Q96MP5 696 aa28.14■■■□□ 2.09
HOXB3-207ENST00000472863 DDX50Q9BQ39 737 aaKnown RBP28.14■■■□□ 2.09
HOXB3-207ENST00000472863 EPB41L4BQ9H329 900 aa28.14■■■□□ 2.09
HOXB3-207ENST00000472863 CHADO15335 359 aa28.13■■■□□ 2.09
HOXB3-207ENST00000472863 ZBTB24O43167 697 aaPredicted RBP28.13■■■□□ 2.09
HOXB3-207ENST00000472863 RAMP2O60895 175 aa28.13■■■□□ 2.09
HOXB3-207ENST00000472863 CCNB1P14635 433 aa28.13■■■□□ 2.09
HOXB3-207ENST00000472863 MTM1Q13496 603 aa28.13■■■□□ 2.09
HOXB3-207ENST00000472863 ARHGAP15Q53QZ3 475 aa28.13■■■□□ 2.09
HOXB3-207ENST00000472863 ING5Q8WYH8 240 aa28.13■■■□□ 2.09
HOXB3-207ENST00000472863 TSPYL1Q9H0U9 437 aa28.13■■■□□ 2.09
HOXB3-207ENST00000472863 LSM7Q9UK45 103 aaKnown RBP28.13■■■□□ 2.09
HOXB3-207ENST00000472863 ARHGAP26Q9UNA1 814 aa28.13■■■□□ 2.09
HOXB3-207ENST00000472863 REV3LO60673 3130 aa28.13■■■□□ 2.09
HOXB3-207ENST00000472863 DDX6P26196 483 aaKnown RBP eCLIP28.12■■■□□ 2.093e-6■■■□□ 19.1
HOXB3-207ENST00000472863 PSMB4P28070 264 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 ACVRL1P37023 503 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 CBX2Q14781 532 aaPredicted RBP28.12■■■□□ 2.09
HOXB3-207ENST00000472863 FNBP1LQ5T0N5 605 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 LRRC49Q8IUZ0 686 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 BBS7Q8IWZ6 715 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 ZNF419Q96HQ0 510 aaPredicted RBP28.12■■■□□ 2.09
HOXB3-207ENST00000472863 FOXP3Q9BZS1 431 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.12■■■□□ 2.09
HOXB3-207ENST00000472863 ARHGAP42A6NI28 874 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 J3KR12 359 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 MATN3O15232 486 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 POU2F2P09086 479 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 CD68P34810 354 aaPredicted RBP28.12■■■□□ 2.09
HOXB3-207ENST00000472863 FAM193AP78312 1265 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 PARP6Q2NL67 630 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 HP1BP3Q5SSJ5 553 aaPredicted RBP28.12■■■□□ 2.09
HOXB3-207ENST00000472863 CFAP58Q5T655 872 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 CNTD1Q8N815 330 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 SH3RF2Q8TEC5 729 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 ZIM3Q96PE6 472 aa28.12■■■□□ 2.09
HOXB3-207ENST00000472863 PABPC3Q9H361 631 aaKnown RBP28.12■■■□□ 2.09
HOXB3-207ENST00000472863 CDC42EP4Q9H3Q1 356 aaKnown RBP28.12■■■□□ 2.09
HOXB3-207ENST00000472863 A0A0D9SEW6 157 aa28.11■■■□□ 2.09
HOXB3-207ENST00000472863 BANF1O75531 89 aa28.11■■■□□ 2.09
HOXB3-207ENST00000472863 MAGEA6P43360 314 aa28.11■■■□□ 2.09
HOXB3-207ENST00000472863 SEMA5AQ13591 1074 aa28.11■■■□□ 2.09
HOXB3-207ENST00000472863 MSS51Q4VC12 460 aa28.11■■■□□ 2.09
HOXB3-207ENST00000472863 ZNF354CQ86Y25 554 aa28.11■■■□□ 2.09
HOXB3-207ENST00000472863 RIN3Q8TB24 985 aa28.11■■■□□ 2.09
HOXB3-207ENST00000472863 ITFG1Q8TB96 612 aa28.11■■■□□ 2.09
HOXB3-207ENST00000472863 USP13Q92995 863 aaPredicted RBP28.11■■■□□ 2.09
HOXB3-207ENST00000472863 TEKT5Q96M29 485 aa28.11■■■□□ 2.09
HOXB3-207ENST00000472863 AGPSO00116 658 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 GFRA2O00451 464 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 CLDN11O75508 207 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 ZNF189O75820 626 aaPredicted RBP28.1■■■□□ 2.09
HOXB3-207ENST00000472863 CEBPBP17676 345 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 HIF1AQ16665 826 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 VAT1Q99536 393 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 SAYSD1Q9NPB0 183 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 TRHDEQ9UKU6 1024 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 PLAAQ9Y263 795 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 MRPS23Q9Y3D9 190 aaKnown RBP28.1■■■□□ 2.09
HOXB3-207ENST00000472863 GOLGA6BA6NDN3 693 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 E7EVH7 732 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 SMAPO00193 183 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 TBL1XO60907 577 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 FDFT1P37268 417 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 YBEYP58557 167 aaPredicted RBP28.1■■■□□ 2.09
HOXB3-207ENST00000472863 FASTKD3Q14CZ7 662 aaKnown RBP28.1■■■□□ 2.09
HOXB3-207ENST00000472863 PARP15Q460N3 678 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 ALS2CLQ60I27 953 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 TIGD7Q6NT04 549 aaPredicted RBP28.1■■■□□ 2.09
HOXB3-207ENST00000472863 MTERF4Q7Z6M4 381 aaKnown RBP28.1■■■□□ 2.09
HOXB3-207ENST00000472863 FAM217AQ8IXS0 508 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 BHMTQ93088 406 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 EXOC4Q96A65 974 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 TMA16Q96EY4 203 aaKnown RBP28.1■■■□□ 2.09
HOXB3-207ENST00000472863 TDP1Q9NUW8 608 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 IGSF9Q9P2J2 1179 aa28.1■■■□□ 2.09
HOXB3-207ENST00000472863 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP28.09■■■□□ 2.09
HOXB3-207ENST00000472863 A0A1B0GVM2 712 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 TCAF2A6NFQ2 919 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 ZNF197O14709 1029 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 PEX11BO96011 259 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 MAGEA4P43358 317 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 IFI35P80217 286 aaPredicted RBP28.09■■■□□ 2.09
HOXB3-207ENST00000472863 ZNF177Q13360 481 aaPredicted RBP28.09■■■□□ 2.09
HOXB3-207ENST00000472863 SERINC3Q13530 473 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 KYNUQ16719 465 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 CHRDL2Q6WN34 429 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 CHST9Q7L1S5 443 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 PDCD7Q8N8D1 485 aaKnown RBP28.09■■■□□ 2.09
HOXB3-207ENST00000472863 OR2W6PQ8NHA6 318 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 C9orf72Q96LT7 481 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 CDCA3Q99618 268 aaPredicted RBP28.09■■■□□ 2.09
HOXB3-207ENST00000472863 IL12RB2Q99665 862 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 GORASP1Q9BQQ3 440 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms