RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TARSL2A2RTX5 802 aaKnown RBP9.64□□□□□ -0.87
VCL-204ENST00000472585 BHMG1C9JSJ3 638 aaPredicted RBP9.64□□□□□ -0.87
VCL-204ENST00000472585 RNASEH1O60930 286 aaKnown RBP9.64□□□□□ -0.87
VCL-204ENST00000472585 SDC3O75056 442 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 RTN2O75298 545 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 USP12O75317 370 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 MYF5P13349 255 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 KRT13P13646 458 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 GOT1P17174 413 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 CMA1P23946 247 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 MAT2AP31153 395 aaKnown RBP9.64□□□□□ -0.87
VCL-204ENST00000472585 LSSP48449 732 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 PSMD8P48556 350 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 NDUFA8P51970 172 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 TBX4P57082 545 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 ZNF445P59923 1031 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 BST2Q10589 180 aaKnown RBP9.64□□□□□ -0.87
VCL-204ENST00000472585 LRMPQ12912 555 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 CUL2Q13617 745 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 DCAF6Q58WW2 860 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 MS4A13Q5J8X5 152 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 SYPL2Q5VXT5 272 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.64□□□□□ -0.87
VCL-204ENST00000472585 ZNF574Q6ZN55 896 aaPredicted RBP9.64□□□□□ -0.87
VCL-204ENST00000472585 CCDC81Q6ZN84 652 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 ATG14Q6ZNE5 492 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 GUF1Q8N442 669 aaKnown RBP9.64□□□□□ -0.87
VCL-204ENST00000472585 CARNMT1Q8N4J0 409 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 KDM1BQ8NB78 822 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 OR14C36Q8NHC7 312 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 FRS2Q8WU20 508 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 CCDC97Q96F63 343 aaPredicted RBP9.64□□□□□ -0.87
VCL-204ENST00000472585 VCPIP1Q96JH7 1222 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 IPO9Q96P70 1041 aaKnown RBP9.64□□□□□ -0.87
VCL-204ENST00000472585 DEPDC7Q96QD5 511 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 OMDQ99983 421 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.64□□□□□ -0.87
VCL-204ENST00000472585 ERVMER34-1Q9H9K5 563 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 POLR1BQ9H9Y6 1135 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 CNGB3Q9NQW8 809 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 UCKL1Q9NWZ5 548 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 FZD4Q9ULV1 537 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 SCML1Q9UN30 329 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 NAALADL1Q9UQQ1 740 aa9.64□□□□□ -0.87
VCL-204ENST00000472585 ITIH6Q6UXX5 1313 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 TBC1D3DA0A087WVF3 549 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 TBC1D3IA0A087WXS9 549 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 TBC1D3EA0A087X179 549 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 TBC1D3KA0A087X1G2 549 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 LY6G6EA0A0G2JKS1 128 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 FAM237AA0A1B0GTK4 181 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 A0A1W2PNU3 283 aaPredicted RBP9.63□□□□□ -0.87
VCL-204ENST00000472585 TBC1D3FA6NER0 549 aaPredicted RBP9.63□□□□□ -0.87
VCL-204ENST00000472585 TBC1D3LB9A6J9 549 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 K7ENP7 123 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 SIGLEC6O43699 453 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 MAGEC1O60732 1142 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 DXOO77932 396 aaKnown RBP9.63□□□□□ -0.87
VCL-204ENST00000472585 TBC1D3HP0C7X1 549 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 VDRP11473 427 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 CD19P15391 556 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 MZF1P28698 734 aaPredicted RBP9.63□□□□□ -0.87
VCL-204ENST00000472585 RBMS1P29558 406 aaKnown RBP9.63□□□□□ -0.87
VCL-204ENST00000472585 MXI1P50539 228 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 PMS1P54277 932 aaKnown RBP9.63□□□□□ -0.87
VCL-204ENST00000472585 PRSS12P56730 875 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 TAS2R38P59533 333 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 PITX1P78337 314 aaPredicted RBP9.63□□□□□ -0.87
VCL-204ENST00000472585 ECT2LQ008S8 904 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 TBC1D3GQ6DHY5 549 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 TBC1D3CQ6IPX1 549 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 INO80CQ6PI98 192 aaPredicted RBP9.63□□□□□ -0.87
VCL-204ENST00000472585 LCLAT1Q6UWP7 414 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 SND1Q7KZF4 910 aaKnown RBP eCLIP9.63□□□□□ -0.873e-6■■□□□ 12.7
VCL-204ENST00000472585 TBC1D3Q8IZP1 549 aaPredicted RBP9.63□□□□□ -0.87
VCL-204ENST00000472585 CCDC150Q8NCX0 1101 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 OR52K2Q8NGK3 314 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 DQX1Q8TE96 717 aaKnown RBP9.63□□□□□ -0.87
VCL-204ENST00000472585 ALG14Q96F25 216 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 ARHGAP9Q9BRR9 750 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 GOLPH3LQ9H4A5 285 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 SEPT3Q9UH03 358 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 DACH1Q9UI36 760 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 CYTH4Q9UIA0 394 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 ZDHHC9Q9Y397 364 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 U3KQA8 63 aa9.63□□□□□ -0.87
VCL-204ENST00000472585 TLN1Q9Y490 2541 aaKnown RBP9.63□□□□□ -0.87
VCL-204ENST00000472585 EDDM13A0A1B0GTR0 161 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 CASC3O15234 703 aaKnown RBP9.62□□□□□ -0.87
VCL-204ENST00000472585 IRAK2O43187 625 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 LUC7L3O95232 432 aaKnown RBP9.62□□□□□ -0.87
VCL-204ENST00000472585 LTFP02788 710 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 ASLP04424 464 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 SRPRAP08240 638 aaKnown RBP9.62□□□□□ -0.87
VCL-204ENST00000472585 SETSIPP0DME0 302 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 C5AR1P21730 350 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 BRD2P25440 801 aaKnown RBP9.62□□□□□ -0.87
VCL-204ENST00000472585 RPL34P49207 117 aaKnown RBP9.62□□□□□ -0.87
VCL-204ENST00000472585 SLC11A2P49281 568 aa9.62□□□□□ -0.87
VCL-204ENST00000472585 IRAK1P51617 712 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms