RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 FAM3CQ92520 227 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 ACDQ96AP0 544 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 CELF6Q96J87 481 aaKnown RBP17.27■□□□□ 0.36
CCM2-205ENST00000472223 FEM1AQ9BSK4 669 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 FRMD8P1Q9BZ68 369 aaPredicted RBP17.27■□□□□ 0.36
CCM2-205ENST00000472223 BRD8Q9H0E9 1235 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 HAUS2Q9NVX0 235 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 SLC25A13Q9UJS0 675 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 SLC8A2Q9UPR5 921 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 ZSCAN5CA6NGD5 496 aaPredicted RBP17.26■□□□□ 0.35
CCM2-205ENST00000472223 CBX4O00257 560 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 STK25O00506 426 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 MCF2LO15068 1137 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 NEBLO76041 1014 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 KAT7O95251 611 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 DRD1P21728 446 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 HLA-FP30511 346 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 CD70P32970 193 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 OPRD1P41143 372 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 SOX9P48436 509 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 GALK1P51570 392 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 PLK1P53350 603 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 ST8SIA6P61647 398 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 EIF4HQ15056 248 aaKnown RBP17.26■□□□□ 0.35
CCM2-205ENST00000472223 PITRM1Q5JRX3 1037 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 RNF43Q68DV7 783 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 TIGD7Q6NT04 549 aaPredicted RBP17.26■□□□□ 0.35
CCM2-205ENST00000472223 ACTRT1Q8TDG2 376 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 ARHGEF2Q92974 986 aaKnown RBP17.26■□□□□ 0.35
CCM2-205ENST00000472223 CAPZA3Q96KX2 299 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 CIPCQ9C0C6 399 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 SLC39A8Q9C0K1 460 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 SP110Q9HB58 689 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 ARHGEF3Q9NR81 526 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 NDFIP2Q9NV92 336 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 ETNK2Q9NVF9 386 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 MUTYHQ9UIF7 546 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 CA14Q9ULX7 337 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 PLA2G4CQ9UP65 541 aa17.26■□□□□ 0.35
CCM2-205ENST00000472223 MIA3Q5JRA6 1907 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 ASLP04424 464 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 CISD3P0C7P0 127 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 TNFRSF4P43489 277 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 PAPOLAP51003 745 aaKnown RBP17.25■□□□□ 0.35
CCM2-205ENST00000472223 GBE1Q04446 702 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 PON2Q15165 354 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 PLEKHG6Q3KR16 790 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 ADAT2Q7Z6V5 191 aaKnown RBP17.25■□□□□ 0.35
CCM2-205ENST00000472223 METTL3Q86U44 580 aaKnown RBP17.25■□□□□ 0.35
CCM2-205ENST00000472223 C12orf40Q86WS4 652 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 BBS5Q8N3I7 341 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 RASGEF1CQ8N431 466 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.25■□□□□ 0.35
CCM2-205ENST00000472223 TERB1Q8NA31 727 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 NELL2Q99435 816 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 LRRC19Q9H756 370 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 ZNF212Q9UDV6 495 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 TTC7AQ9ULT0 858 aaPredicted RBP17.25■□□□□ 0.35
CCM2-205ENST00000472223 CLEC4EQ9ULY5 219 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 NUP205Q92621 2012 aa17.25■□□□□ 0.35
CCM2-205ENST00000472223 A0A0D9SEW6 157 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 HACD1B0YJ81 288 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 H7C0C1 242 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 KDELR3O43731 214 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 MFSD11O43934 449 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 MZF1P28698 734 aaPredicted RBP17.24■□□□□ 0.35
CCM2-205ENST00000472223 ATP5OP48047 213 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 CKAP4Q07065 602 aaKnown RBP17.24■□□□□ 0.35
CCM2-205ENST00000472223 SLC20A2Q08357 652 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 GALNT2Q10471 571 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 AP1B1Q10567 949 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 XRCC4Q13426 336 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 SERINC3Q13530 473 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 FBXO43Q4G163 708 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 MBLAC2Q68D91 279 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 NPWQ8N729 165 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 DCAF4L2Q8NA75 395 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 OR7D4Q8NG98 312 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 WFDC5Q8TCV5 224 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 COG1Q8WTW3 980 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 TFB1MQ8WVM0 346 aaKnown RBP17.24■□□□□ 0.35
CCM2-205ENST00000472223 CHFRQ96EP1 664 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 HMCESQ96FZ2 354 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 MS4A14Q96JA4 679 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 DTLQ9NZJ0 730 aa17.24■□□□□ 0.35
CCM2-205ENST00000472223 IPO11Q9UI26 975 aaKnown RBP17.24■□□□□ 0.35
CCM2-205ENST00000472223 KRIT1O00522 736 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 NPC1O15118 1278 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 ZNF185O15231 689 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 MTSS1O43312 755 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 STK10O94804 968 aaKnown RBP17.23■□□□□ 0.35
CCM2-205ENST00000472223 ALADP13716 330 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 CCNCP24863 283 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 ACVRL1P37023 503 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 GARSP41250 739 aaKnown RBP17.23■□□□□ 0.35
CCM2-205ENST00000472223 EIF3EP60228 445 aaKnown RBP17.23■□□□□ 0.35
CCM2-205ENST00000472223 ECT2LQ008S8 904 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 OTUD4Q01804 1114 aaKnown RBP17.23■□□□□ 0.35
CCM2-205ENST00000472223 ZNF33AQ06730 810 aa17.23■□□□□ 0.35
CCM2-205ENST00000472223 IL10RBQ08334 325 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms