RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 SNED1Q8TER0 1413 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 GOT1P17174 413 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 SKP1P63208 163 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 SLC25A52Q3SY17 297 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 GALNTL6Q49A17 601 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 PATL1Q86TB9 770 aaKnown RBP12.49□□□□□ -0.41
IRF1-208ENST00000472045 IFNEQ86WN2 208 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 EXOC2Q96KP1 924 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 ING2Q9H160 280 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 LHX5Q9H2C1 402 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 ZNHIT2Q9UHR6 403 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 DOT1LQ8TEK3 1739 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 PTPRJQ12913 1337 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 ZBTB14O43829 449 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 FMO4P31512 558 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 ATP6V1E1P36543 226 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 KCNMA1Q12791 1236 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 PSTKQ8IV42 348 aaKnown RBP12.49□□□□□ -0.41
IRF1-208ENST00000472045 FBXO25Q8TCJ0 367 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 ZNF670Q9BS34 389 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 MORC2Q9Y6X9 1032 aaPredicted RBP12.49□□□□□ -0.41
IRF1-208ENST00000472045 ZNF536O15090 1300 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 NRP1O14786 923 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 C4BPAP04003 597 aaKnown RBP12.48□□□□□ -0.41
IRF1-208ENST00000472045 ERCC2P18074 760 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 HSD17B3P37058 310 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 GP5P40197 560 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 WASP42768 502 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 INPP5AQ14642 412 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 IRGQQ8WZA9 623 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 SEMA4DQ92854 862 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 RNF157Q96PX1 679 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 RBBP8Q99708 897 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 AURKCQ9UQB9 309 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 ARL2BPQ9Y2Y0 163 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 CACNB4O00305 520 aaPredicted RBP12.48□□□□□ -0.41
IRF1-208ENST00000472045 OPLAHO14841 1288 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 CES1P23141 567 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 PSMB4P28070 264 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 PRIM2P49643 509 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 ERVK-21P61565 698 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 TMEM63BQ5T3F8 832 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 LNX1Q8TBB1 728 aaPredicted RBP12.48□□□□□ -0.41
IRF1-208ENST00000472045 PIP4K2CQ8TBX8 421 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 TRIB2Q92519 343 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 NAF1Q96HR8 494 aaKnown RBP12.48□□□□□ -0.41
IRF1-208ENST00000472045 CDC42EP4Q9H3Q1 356 aaKnown RBP12.48□□□□□ -0.41
IRF1-208ENST00000472045 ETNK1Q9HBU6 452 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 SOHLH2Q9NX45 425 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.48□□□□□ -0.41
IRF1-208ENST00000472045 TEKT2Q9UIF3 430 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 L1RE1Q9UN81 338 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 STXBP5LQ9Y2K9 1186 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 C1orf232A0A0U1RR37 186 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 KLHL2O95198 593 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 SNAI1O95863 264 aaPredicted RBP12.48□□□□□ -0.41
IRF1-208ENST00000472045 CST3P01034 146 aaPredicted RBP12.48□□□□□ -0.41
IRF1-208ENST00000472045 CATP04040 527 aaKnown RBP12.48□□□□□ -0.41
IRF1-208ENST00000472045 MDH1P40925 334 aaKnown RBP12.48□□□□□ -0.41
IRF1-208ENST00000472045 SP2Q02086 613 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 GRM3Q14832 879 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 MEA1Q16626 185 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 TMEM259Q4ZIN3 620 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 TPGS2Q68CL5 300 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 CES3Q6UWW8 571 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 NPNTQ6UXI9 565 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 CHST9Q7L1S5 443 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 SLC22A9Q8IVM8 553 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 SPACA7Q96KW9 195 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 ZIM3Q96PE6 472 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.48□□□□□ -0.41
IRF1-208ENST00000472045 F2P00734 622 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 KRT6AP02538 564 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 KRT6BP04259 564 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 NFKB1P19838 968 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 PBX3P40426 434 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 KRT6CP48668 564 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 PEX6Q13608 980 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 BMPR2Q13873 1038 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 GRTP1Q5TC63 336 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 PCED1BQ96HM7 432 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 ACOX2Q99424 681 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 B3GNT5Q9BYG0 378 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 FGFBP2Q9BYJ0 223 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 RAD54BQ9Y620 910 aa12.48□□□□□ -0.41
IRF1-208ENST00000472045 EPHX1P07099 455 aa12.47□□□□□ -0.41
IRF1-208ENST00000472045 HPGDP15428 266 aa12.47□□□□□ -0.41
IRF1-208ENST00000472045 HOXB8P17481 243 aaPredicted RBP12.47□□□□□ -0.41
IRF1-208ENST00000472045 KRT20P35900 424 aa12.47□□□□□ -0.41
IRF1-208ENST00000472045 SLC10A6Q3KNW5 377 aa12.47□□□□□ -0.41
IRF1-208ENST00000472045 PPP1R15BQ5SWA1 713 aa12.47□□□□□ -0.41
IRF1-208ENST00000472045 ARL14EPQ8N8R7 260 aaPredicted RBP12.47□□□□□ -0.41
IRF1-208ENST00000472045 ELMO1Q92556 727 aa12.47□□□□□ -0.41
IRF1-208ENST00000472045 TMEM175Q9BSA9 504 aa12.47□□□□□ -0.41
IRF1-208ENST00000472045 FAM47E-STBD1D6RA91 191 aa12.47□□□□□ -0.41
IRF1-208ENST00000472045 F8W810 466 aa12.47□□□□□ -0.41
IRF1-208ENST00000472045 AGRPO00253 132 aa12.47□□□□□ -0.41
IRF1-208ENST00000472045 PER2O15055 1255 aa12.47□□□□□ -0.41
IRF1-208ENST00000472045 MPOP05164 745 aa12.47□□□□□ -0.41
IRF1-208ENST00000472045 WARSP23381 471 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms