RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 ZNF354CQ86Y25 554 aa15.21■□□□□ 0.03
SSR4-208ENST00000471880 SLC41A1Q8IVJ1 513 aa15.21■□□□□ 0.03
SSR4-208ENST00000471880 STK40Q8N2I9 435 aa15.21■□□□□ 0.03
SSR4-208ENST00000471880 CCDC185Q8N715 623 aa15.21■□□□□ 0.03
SSR4-208ENST00000471880 OR52K2Q8NGK3 314 aa15.21■□□□□ 0.03
SSR4-208ENST00000471880 FOXJ1Q92949 421 aa15.21■□□□□ 0.03
SSR4-208ENST00000471880 OMDQ99983 421 aa15.21■□□□□ 0.03
SSR4-208ENST00000471880 FEM1AQ9BSK4 669 aa15.21■□□□□ 0.03
SSR4-208ENST00000471880 GTPBP2Q9BX10 602 aaKnown RBP15.21■□□□□ 0.03
SSR4-208ENST00000471880 ZYG11BQ9C0D3 744 aa15.21■□□□□ 0.03
SSR4-208ENST00000471880 FSCN3Q9NQT6 498 aa15.21■□□□□ 0.03
SSR4-208ENST00000471880 WSB2Q9NYS7 404 aaPredicted RBP15.21■□□□□ 0.03
SSR4-208ENST00000471880 USP36Q9P275 1121 aaKnown RBP15.21■□□□□ 0.03
SSR4-208ENST00000471880 MYO1AQ9UBC5 1043 aa15.21■□□□□ 0.03
SSR4-208ENST00000471880 OR12D3Q9UGF7 316 aa15.21■□□□□ 0.03
SSR4-208ENST00000471880 MID1O15344 667 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 RNASEH2AO75792 299 aaKnown RBP15.2■□□□□ 0.02
SSR4-208ENST00000471880 IL1BP01584 269 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 VAV1P15498 845 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 ADRA1BP35368 520 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 DPP6P42658 865 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 RPL7AP62424 266 aaKnown RBP15.2■□□□□ 0.02
SSR4-208ENST00000471880 IRX4P78413 519 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 ACBD5Q5T8D3 534 aaPredicted RBP15.2■□□□□ 0.02
SSR4-208ENST00000471880 STPG1Q5TH74 334 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 DCAF12L1Q5VU92 463 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 METTL3Q86U44 580 aaKnown RBP15.2■□□□□ 0.02
SSR4-208ENST00000471880 VPS36Q86VN1 386 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 ATP11CQ8NB49 1132 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 ZNF653Q96CK0 615 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 MYO19Q96H55 970 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 C1orf74Q96LT6 269 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 RTKNQ9BST9 563 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 C2orf49Q9BVC5 232 aaPredicted RBP15.2■□□□□ 0.02
SSR4-208ENST00000471880 BTBD1Q9H0C5 482 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 PARVAQ9NVD7 372 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 PILRBQ9UKJ0 227 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 TP53BP1Q12888 1972 aaPredicted RBP15.2■□□□□ 0.02
SSR4-208ENST00000471880 PCDH15Q96QU1 1955 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 DOCK9Q9BZ29 2069 aa15.2■□□□□ 0.02
SSR4-208ENST00000471880 LNP1A1A4G5 178 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 TARSL2A2RTX5 802 aaKnown RBP15.19■□□□□ 0.02
SSR4-208ENST00000471880 CBX4O00257 560 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 CREB3O43889 395 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 SNAP91O60641 907 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 ENDOD1O94919 500 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 FSBPO95073 299 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 FTLP02792 175 aaPredicted RBP15.19■□□□□ 0.02
SSR4-208ENST00000471880 GNSP15586 552 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 PSMA2P25787 234 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 ACSL1P33121 698 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 ZNF143P52747 638 aaPredicted RBP15.19■□□□□ 0.02
SSR4-208ENST00000471880 HDAC4P56524 1084 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 GSCP56915 257 aaPredicted RBP15.19■□□□□ 0.02
SSR4-208ENST00000471880 SFSWAPQ12872 951 aaKnown RBP15.19■□□□□ 0.02
SSR4-208ENST00000471880 CST6Q15828 149 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 DUOXA1Q1HG43 343 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 POM121L1PQ3SYA9 428 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 EFHC2Q5JST6 749 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 C9orf64Q5T6V5 341 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 LINGO4Q6UY18 593 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 Q6ZVU0 165 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 SLFN11Q7Z7L1 901 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 ZCCHC9Q8N567 271 aaKnown RBP15.19■□□□□ 0.02
SSR4-208ENST00000471880 KDM1BQ8NB78 822 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 OR7D4Q8NG98 312 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 EDEM3Q9BZQ6 932 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 XPO4Q9C0E2 1151 aaKnown RBP15.19■□□□□ 0.02
SSR4-208ENST00000471880 TTYH3Q9C0H2 523 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 RSPH9Q9H1X1 276 aaPredicted RBP15.19■□□□□ 0.02
SSR4-208ENST00000471880 ATP13A1Q9HD20 1204 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 TMEM9BQ9NQ34 198 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 FBXL12Q9NXK8 326 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 AIPL1Q9NZN9 384 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 CNOT8Q9UFF9 292 aaKnown RBP15.19■□□□□ 0.02
SSR4-208ENST00000471880 DNAI1Q9UI46 699 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 TBC1D30Q9Y2I9 924 aa15.19■□□□□ 0.02
SSR4-208ENST00000471880 LUC7L2Q9Y383 392 aaKnown RBP15.19■□□□□ 0.02
SSR4-208ENST00000471880 A0A0D9SEW6 157 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 A0A1W2PP55 124 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 MED19A0JLT2 244 aaPredicted RBP15.18■□□□□ 0.02
SSR4-208ENST00000471880 DRGXA6NNA5 263 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 C4orf47A7E2U8 309 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 SLC30A4O14863 429 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 CBFA2T2O43439 604 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 SEMA4FO95754 770 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 PLEKP08567 350 aaPredicted RBP15.18■□□□□ 0.02
SSR4-208ENST00000471880 SLC8A1P32418 973 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 DNA2P51530 1060 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 PLK1P53350 603 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 ZBTB16Q05516 673 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 GFPT1Q06210 699 aaPredicted RBP15.18■□□□□ 0.02
SSR4-208ENST00000471880 DLG2Q15700 870 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 C5orf22Q49AR2 442 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 TMC6Q7Z403 805 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 RABEPKQ7Z6M1 372 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 DSG4Q86SJ6 1040 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 SETD3Q86TU7 594 aaPredicted RBP15.18■□□□□ 0.02
SSR4-208ENST00000471880 ZNF683Q8IZ20 524 aa15.18■□□□□ 0.02
SSR4-208ENST00000471880 HDDC3Q8N4P3 179 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms