RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-228	ENST00000471635	ARL15	Q9NXU5	204 aa		4.2	□□□□□ -1.74
RBM39-228	ENST00000471635	DTX4	Q9Y2E6	619 aa		4.2	□□□□□ -1.74
RBM39-228	ENST00000471635	KIF26B	Q2KJY2	2108 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	OBSCN	Q5VST9	7968 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	TCRBV7S3A2	A0A539	114 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	ANO9	A1A5B4	782 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	SLC38A8	A6NNN8	435 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635		I6L893	689 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	ASNA1	O43681	348 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	CHRNB2	P17787	502 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	TNFSF8	P32971	234 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	AK2	P54819	239 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	ABAT	P80404	500 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	RHAG	Q02094	409 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	ZBTB16	Q05516	673 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635		Q0VFX4	171 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	IZUMO4	Q1ZYL8	232 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	BTBD16	Q32M84	506 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	AAGAB	Q6PD74	315 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	SLC30A9	Q6PML9	568 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	ANKS1B	Q7Z6G8	1248 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	C11orf96	Q7Z7L8	435 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	IGFN1	Q86VF2	1251 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	CAMK1D	Q8IU85	385 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	FAM185A	Q8N0U4	392 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	LRRC57	Q8N9N7	239 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	KDM1B	Q8NB78	822 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	LMO3	Q8TAP4	145 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	HMGB4	Q8WW32	186 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	TM6SF1	Q9BZW5	370 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	B3GNT4	Q9C0J1	378 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	FNIP2	Q9P278	1114 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	PHTF1	Q9UMS5	762 aa		4.19	□□□□□ -1.74
RBM39-228	ENST00000471635	TRBV5-7	A0A0A0MS05	114 aa		4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	AGAP5	A6NIR3	686 aa		4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	AQP12B	A6NM10	295 aa		4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	PMS2	P54278	862 aa		4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	RPL36A	P83881	106 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	TMEM200A	Q86VY9	491 aa		4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	GATAD2A	Q86YP4	633 aa		4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	DPP10	Q8N608	796 aa		4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	ADAMTS14	Q8WXS8	1223 aa		4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	TP63	Q9H3D4	680 aa	Predicted RBP	4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	CATSPERB	Q9H7T0	1116 aa		4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	CNTN6	Q9UQ52	1028 aa		4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	PCDHGB1	Q9Y5G3	927 aa		4.18	□□□□□ -1.74
RBM39-228	ENST00000471635	STMND1	H3BQB6	276 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	LIAS	O43766	372 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	LARGE1	O95461	756 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	PDLIM4	P50479	330 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	CYP2J2	P51589	502 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	RCAN1	P53805	252 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	ZP1	P60852	638 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	SHB	Q15464	509 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	DUSP6	Q16828	381 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	IL31	Q6EBC2	164 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	KIAA1324	Q6UXG2	1013 aa	Known RBP	4.17	□□□□□ -1.74
RBM39-228	ENST00000471635		Q6ZSV7	163 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	SYTL1	Q8IYJ3	562 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	STYX	Q8WUJ0	223 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	APOLD1	Q96LR9	279 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	MYD88	Q99836	296 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	HDHD5	Q9BXW7	423 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	CDT1	Q9H211	546 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	RMI1	Q9H9A7	625 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	PLSCR4	Q9NRQ2	329 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	MDFIC	Q9P1T7	246 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	PKP3	Q9Y446	797 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	SLC4A4	Q9Y6R1	1079 aa		4.17	□□□□□ -1.74
RBM39-228	ENST00000471635	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	TNFRSF6B	O95407	300 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	PRSS2	P07478	247 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	PKM	P14618	531 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	GNAL	P38405	381 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	NEK3	P51956	506 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	ART1	P52961	327 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	GAS1	P54826	345 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	HLTF	Q14527	1009 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	STARD3	Q14849	445 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	FSCB	Q5H9T9	825 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	CCDC181	Q5TID7	509 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	FAM171A1	Q5VUB5	890 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	TMEM71	Q6P5X7	295 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	ZNF367	Q7RTV3	350 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	DNASE2B	Q8WZ79	361 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	TNIP3	Q96KP6	325 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	HIPK3	Q9H422	1215 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	SLC25A13	Q9UJS0	675 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	RAP2C	Q9Y3L5	183 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	PCDHA10	Q9Y5I2	948 aa		4.16	□□□□□ -1.74
RBM39-228	ENST00000471635	CLEC18A	A5D8T8	446 aa		4.15	□□□□□ -1.75
RBM39-228	ENST00000471635	FAM90A18P	A6NE21	464 aa		4.15	□□□□□ -1.75

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