RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ENTPD2Q9Y5L3 495 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 DOPEY2Q9Y3R5 2298 aa7.1□□□□□ -1.27
HDAC1-204ENST00000471488 CCDC187A0A096LP49 1063 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 SCAMP1O15126 338 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 IRAK2O43187 625 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 PLRG1O43660 514 aaKnown RBP7.09□□□□□ -1.27
HDAC1-204ENST00000471488 LUC7L3O95232 432 aaKnown RBP7.09□□□□□ -1.27
HDAC1-204ENST00000471488 NR3C1P04150 777 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 SFTPCP11686 197 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 KRT13P13646 458 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 VAMP7P51809 220 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 MAPK10P53779 464 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 INHBCP55103 352 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 HNRNPKP61978 463 aaKnown RBP eCLIP7.09□□□□□ -1.27
HDAC1-204ENST00000471488 SNRPFP62306 86 aaKnown RBP7.09□□□□□ -1.27
HDAC1-204ENST00000471488 INCA1Q0VD86 236 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 C1orf61Q13536 156 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 TBR1Q16650 682 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 DCAF6Q58WW2 860 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 FAM133BQ5BKY9 247 aaKnown RBP7.09□□□□□ -1.27
HDAC1-204ENST00000471488 PERM1Q5SV97 790 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 RAP1GAP2Q684P5 730 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 NUGGCQ68CJ6 796 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 ZCCHC8Q6NZY4 707 aaKnown RBP7.09□□□□□ -1.27
HDAC1-204ENST00000471488 Q6ZSR6 202 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 Q6ZVU0 165 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 CHSY1Q86X52 802 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 GRAMD1CQ8IYS0 662 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 FBXO39Q8N4B4 442 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 ZNF548Q8NEK5 533 aaPredicted RBP7.09□□□□□ -1.27
HDAC1-204ENST00000471488 GOLGA5Q8TBA6 731 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 SNRNP27Q8WVK2 155 aaKnown RBP7.09□□□□□ -1.27
HDAC1-204ENST00000471488 PTPRN2Q92932 1015 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 MYEOVQ96EZ4 313 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 SPAG5Q96R06 1193 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 CCDC3Q9BQI4 270 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 MIS12Q9H081 205 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 NUCKS1Q9H1E3 243 aaKnown RBP7.09□□□□□ -1.27
HDAC1-204ENST00000471488 SLC25A18Q9H1K4 315 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 CYP3A43Q9HB55 503 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 CISHQ9NSE2 258 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 KCNK4Q9NYG8 393 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 SIRPGQ9P1W8 387 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 CGNQ9P2M7 1197 aaKnown RBP7.09□□□□□ -1.27
HDAC1-204ENST00000471488 TJP2Q9UDY2 1190 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 SLC25A13Q9UJS0 675 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 SARDHQ9UL12 918 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 ATXN7L1Q9ULK2 861 aaPredicted RBP7.09□□□□□ -1.27
HDAC1-204ENST00000471488 SRPK3Q9UPE1 567 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 DOLKQ9UPQ8 538 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 PCDHB11Q9Y5F2 797 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 PTPN13Q12923 2485 aa7.09□□□□□ -1.27
HDAC1-204ENST00000471488 BOD1L1Q8NFC6 3051 aa7.09□□□□□ -1.28
HDAC1-204ENST00000471488 SYNJ2BP-COX16A0A087WUM0 186 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 LY6G6EA0A0G2JKS1 128 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 A6NNZ2 444 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 CDRT15L2A8MXV6 281 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 PLD2O14939 933 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 AQP9O43315 295 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 ENDOD1O94919 500 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 LATS1O95835 1130 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 NEFLP07196 543 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 ITGA2BP08514 1039 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 PDIA4P13667 645 aaKnown RBP7.08□□□□□ -1.28
HDAC1-204ENST00000471488 JUNDP17535 347 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 CR2P20023 1033 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 HNRNPA2B1P22626 353 aaKnown RBP7.08□□□□□ -1.28
HDAC1-204ENST00000471488 NUDT1P36639 197 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 RPIAP49247 311 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 BST2Q10589 180 aaKnown RBP7.08□□□□□ -1.28
HDAC1-204ENST00000471488 NCAPHQ15003 741 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 FOXD4L6Q3SYB3 417 aaPredicted RBP7.08□□□□□ -1.28
HDAC1-204ENST00000471488 MPP7Q5T2T1 576 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 AGBL4Q5VU57 503 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 SEL1L3Q68CR1 1132 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 NADSYN1Q6IA69 706 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 FOXD4L3Q6VB84 417 aaPredicted RBP7.08□□□□□ -1.28
HDAC1-204ENST00000471488 UNC13DQ70J99 1090 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 RAB11FIP2Q7L804 512 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 TRIM69Q86WT6 500 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 IQUBQ8NA54 791 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 ANKRD52Q8NB46 1076 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 SLC4A11Q8NBS3 891 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 GRIN3AQ8TCU5 1115 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 CLEC4CQ8WTT0 213 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 GLMNQ92990 594 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 FAM149B1Q96BN6 582 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 STRADBQ9C0K7 418 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 EPN3Q9H201 632 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 KDM4CQ9H3R0 1056 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 USP29Q9HBJ7 922 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 PREBQ9HCU5 417 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 EXOC1Q9NV70 894 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 COX16Q9P0S2 106 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 TSPAN16Q9UKR8 245 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 FARP1Q9Y4F1 1045 aaPredicted RBP7.08□□□□□ -1.28
HDAC1-204ENST00000471488 PCDHGA8Q9Y5G5 932 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 U3KQA8 63 aa7.08□□□□□ -1.28
HDAC1-204ENST00000471488 UBR5O95071 2799 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-204ENST00000471488 ENO4A6NNW6 628 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms