RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PRPH2P23942 346 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 CHRNA5P30532 468 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 TNFSF8P32971 234 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 MLH1P40692 756 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ENTPD1P49961 510 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 RASSF2P50749 326 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 RCAN1P53805 252 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 POLE2P56282 527 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 TMPRSS3P57727 454 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 SELENOVP59797 346 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ROR2Q01974 943 aaKnown RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 LTBQ06643 244 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 TRAF1Q13077 416 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 SPARCL1Q14515 664 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ASIC2Q16515 512 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 SLC4A8Q2Y0W8 1093 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 GXYLT1Q4G148 440 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ZNF569Q5MCW4 686 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 WASHC2DQ5SRD0 308 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 TTC22Q5TAA0 569 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 FAM171A1Q5VUB5 890 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 NFRKBQ6P4R8 1299 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 PDXDC1Q6P996 788 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 SLC30A9Q6PML9 568 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 KIAA1324Q6UXG2 1013 aaKnown RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 C18orf65Q6ZTR6 163 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 TRILQ7L0X0 811 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 RAB11FIP2Q7L804 512 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ANKS1BQ7Z6G8 1248 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 MORC1Q86VD1 984 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 IGFN1Q86VF2 1251 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 FAM185AQ8N0U4 392 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 CADM3Q8N126 398 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 DPP10Q8N608 796 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 IQCF1Q8N6M8 205 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 TMEM217Q8N7C4 229 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ENDOVQ8N8Q3 282 aaKnown RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 PRR26Q8N8Z3 221 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 LRRC57Q8N9N7 239 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 KDM1BQ8NB78 822 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ENGASEQ8NFI3 743 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 CMASQ8NFW8 434 aaPredicted RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 OR1N1Q8NGS0 311 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 GABPB2Q8TAK5 448 aaPredicted RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 FAM110DQ8TAY7 271 aaPredicted RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 SLC2A12Q8TD20 617 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ELP5Q8TE02 316 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 MED30Q96HR3 178 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 URB1-AS1Q96HZ7 61 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 MEIS3Q99687 375 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ELAC2Q9BQ52 826 aaKnown RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 WDR77Q9BQA1 342 aaPredicted RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 NTPCRQ9BSD7 190 aaKnown RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 RTKNQ9BST9 563 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 KATNAL1Q9BW62 490 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 HDHD5Q9BXW7 423 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 PCGF6Q9BYE7 350 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 B3GNT4Q9C0J1 378 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ISCUQ9H1K1 167 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ELAC1Q9H777 363 aaKnown RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ACTR5Q9H9F9 607 aaPredicted RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 SEPSECSQ9HD40 501 aaKnown RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 NLRC4Q9NPP4 1024 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 CD93Q9NPY3 652 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 LIN7CQ9NUP9 197 aaKnown RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 PLK2Q9NYY3 685 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 SLC25A13Q9UJS0 675 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 FZD10Q9ULW2 581 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 MAGED2Q9UNF1 606 aaPredicted RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 C19orf53Q9UNZ5 99 aaPredicted RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 DTX4Q9Y2E6 619 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 WDR81Q562E7 1941 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 A0A1B0GVT2 93 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 TCRBV7S3A2A0A539 114 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 EME2A4GXA9 379 aaPredicted RBP1.58□□□□□ -2.16
UBXN4-207ENST00000471246 NPIPB13A6NJU9 1138 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 OR6C75A6NL08 312 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 NPIPB5A8MRT5 1133 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 BECN2A8MW95 431 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 EFCAB8A8MWE9 144 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 NPIPB4C9JG80 1138 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 PRSS44E7EML9 344 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 I6L893 689 aaPredicted RBP1.58□□□□□ -2.16
UBXN4-207ENST00000471246 ACKR2O00590 384 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 FFAR2O15552 330 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 SPRY3O43610 288 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 KRT86O43790 486 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 SKAP2O75563 359 aaPredicted RBP1.58□□□□□ -2.16
UBXN4-207ENST00000471246 CYP1A2P05177 515 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 FGF3P11487 239 aaPredicted RBP1.58□□□□□ -2.16
UBXN4-207ENST00000471246 UNGP13051 313 aaPredicted RBP1.58□□□□□ -2.16
UBXN4-207ENST00000471246 PKMP14618 531 aaKnown RBP1.58□□□□□ -2.16
UBXN4-207ENST00000471246 ARSBP15848 533 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 CHRNB2P17787 502 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 KLRC2P26717 231 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 SERPINB3P29508 390 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 TYK2P29597 1187 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 SERPINA4P29622 427 aa1.58□□□□□ -2.16
UBXN4-207ENST00000471246 PDIA3P30101 505 aaKnown RBP1.58□□□□□ -2.16
UBXN4-207ENST00000471246 SLC16A2P36021 539 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms