RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 LTB4R2Q9NPC1 389 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 TRPV5Q9NQA5 729 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 FAM53CQ9NYF3 392 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 DTLQ9NZJ0 730 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 MARCH2Q9P0N8 246 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 CALCOCO1Q9P1Z2 691 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 DNMT3LQ9UJW3 386 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 INSL5Q9Y5Q6 135 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 DNAH14Q0VDD8 3507 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 ESYT3A0FGR9 886 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 ZNF840PA6NDX5 716 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 SGK1O00141 431 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 PRRG1O14668 218 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 CHADO15335 359 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 ADAM12O43184 909 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 LILRB5O75023 590 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 LRIG2O94898 1065 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 NUDT17P0C025 328 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 HMGA1P17096 107 aaKnown RBP9.4□□□□□ -0.9
PTPRE-207ENST00000471218 GOT1P17174 413 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 DDX6P26196 483 aaKnown RBP eCLIP9.4□□□□□ -0.9
PTPRE-207ENST00000471218 ATP5C1P36542 298 aaKnown RBP9.4□□□□□ -0.9
PTPRE-207ENST00000471218 TNNT3P45378 269 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-207ENST00000471218 KCNJ1P48048 391 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 CCR3P51677 355 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 ARPP19P56211 112 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 TBX4P57082 545 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 PITX1P78337 314 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-207ENST00000471218 GALNT2Q10471 571 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 C5orf22Q49AR2 442 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 TMCO4Q5TGY1 634 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 HIBCHQ6NVY1 386 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-207ENST00000471218 DARS2Q6PI48 645 aaKnown RBP9.4□□□□□ -0.9
PTPRE-207ENST00000471218 LRRC31Q6UY01 552 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 PPIL6Q8IXY8 311 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 FBXO25Q8TCJ0 367 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 TFB1MQ8WVM0 346 aaKnown RBP9.4□□□□□ -0.9
PTPRE-207ENST00000471218 NDRG1Q92597 394 aaKnown RBP9.4□□□□□ -0.9
PTPRE-207ENST00000471218 NELL1Q92832 810 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 LRRC39Q96DD0 335 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 B3GALT6Q96L58 329 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 FCRL2Q96LA5 508 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-207ENST00000471218 TTC25Q96NG3 672 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 TSGA13Q96PP4 275 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 FOXQ1Q9C009 403 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 KLC2Q9H0B6 622 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 CRISPLD1Q9H336 500 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 PABPC3Q9H361 631 aaKnown RBP9.4□□□□□ -0.9
PTPRE-207ENST00000471218 CYP4F11Q9HBI6 524 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 USP29Q9HBJ7 922 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 ZFP14Q9HCL3 533 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 EIF2B3Q9NR50 452 aaKnown RBP9.4□□□□□ -0.9
PTPRE-207ENST00000471218 HAUS2Q9NVX0 235 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 OGFRQ9NZT2 677 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 ANAPC5Q9UJX4 755 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 TRHDEQ9UKU6 1024 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 TPX2Q9ULW0 747 aaKnown RBP9.4□□□□□ -0.9
PTPRE-207ENST00000471218 SNX24Q9Y343 169 aa9.4□□□□□ -0.9
PTPRE-207ENST00000471218 FANCMQ8IYD8 2048 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 NCOR2Q9Y618 2525 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 CXorf51AA0A1B0GTR3 108 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 MED19A0JLT2 244 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 GOLGA6BA6NDN3 693 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 ZSCAN5CA6NGD5 496 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 ERI2A8K979 691 aaKnown RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 H7C0C1 242 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 AP3B1O00203 1094 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 CCL16O15467 120 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 OPA1O60313 960 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 SPAG6O75602 509 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 OLFM2O95897 454 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 OAS1P00973 400 aaKnown RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 ABHD2P08910 425 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 PECAM1P16284 738 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 RHOQP17081 205 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 ERCC2P18074 760 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 RPL17P18621 184 aaKnown RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 EPHB2P29323 1055 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 CDC25CP30307 473 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 FDFT1P37268 417 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 ATP5OP48047 213 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 MAPKAPK2P49137 400 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 SLC11A2P49281 568 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 NDST2P52849 883 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 ATXN1P54253 815 aaKnown RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 PLTPP55058 493 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 USP46P62068 366 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 DYNLT1P63172 113 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 PPIDQ08752 370 aaKnown RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 MMRN1Q13201 1228 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 SNX1Q13596 522 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 TAF12Q16514 161 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 RAB6CQ53S08 254 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 HSP90B2PQ58FF3 399 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 C10orf120Q5SQS8 335 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 RNASEH2BQ5TBB1 312 aaKnown RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 HEATR6Q6AI08 1181 aaKnown RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 TPRG1Q6ZUI0 275 aa9.39□□□□□ -0.91
PTPRE-207ENST00000471218 MAML2Q8IZL2 1156 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-207ENST00000471218 IQCKQ8N0W5 287 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms