RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 STILQ15468 1287 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 ASTE1Q2TB18 679 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 INAVAQ3KP66 663 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 PKDCCQ504Y2 493 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 MSANTD2Q6P1R3 559 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 LAYNQ6UX15 382 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 TRIM72Q6ZMU5 477 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 ZNF571Q7Z3V5 609 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 NOP9Q86U38 636 aaKnown RBP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 SIX6OS1Q8N1H7 587 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 PDCD7Q8N8D1 485 aaKnown RBP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 KDM1BQ8NB78 822 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 WFDC5Q8TCV5 224 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 HNRNPLLQ8WVV9 542 aaKnown RBP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 NDRG1Q92597 394 aaKnown RBP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 EDEM1Q92611 657 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 AZIN2Q96A70 460 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 MYO19Q96H55 970 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 LMLNQ96KR4 655 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 ZNF830Q96NB3 372 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 BBC3Q96PG8 261 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 AGPAT1Q99943 283 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 CNGB3Q9NQW8 809 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 SFMBT1Q9UHJ3 866 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 PCDHGA1Q9Y5H4 931 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 EPN1Q9Y6I3 576 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 TMEM131Q92545 1883 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 NUMA1Q14980 2115 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 A0A1B0GTQ1 180 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 A0A1W2PPC4 97 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 EIF3CLB5ME19 914 aaKnown RBP9.37□□□□□ -0.91
SF3A1-206ENST00000471037 O00370 1275 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 VILLO15195 856 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 NDUFA10O95299 355 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 LCA5LO95447 670 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 ASLP04424 464 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 CD19P15391 556 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 POLR2EP19388 210 aaKnown RBP9.37□□□□□ -0.91
SF3A1-206ENST00000471037 CYP4F3Q08477 520 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 SFSWAPQ12872 951 aaKnown RBP9.37□□□□□ -0.91
SF3A1-206ENST00000471037 SPA17Q15506 151 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 SLC18A3Q16572 532 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 HNRNPA1L2Q32P51 320 aaKnown RBP9.37□□□□□ -0.91
SF3A1-206ENST00000471037 FAM133BQ5BKY9 247 aaKnown RBP9.37□□□□□ -0.91
SF3A1-206ENST00000471037 KCNT1Q5JUK3 1230 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 PIK3R6Q5UE93 754 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 NUGGCQ68CJ6 796 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 KIAA0895LQ68EN5 471 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 PPP1R2P3Q6NXS1 205 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 RAD9BQ6WBX8 426 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 ADAT2Q7Z6V5 191 aaKnown RBP9.37□□□□□ -0.91
SF3A1-206ENST00000471037 TMPRSS12Q86WS5 348 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 MARCH9Q86YJ5 346 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 MFN1Q8IWA4 741 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 UNC45BQ8IWX7 931 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 FIBINQ8TAL6 211 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 SLC20A1Q8WUM9 679 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 ZNF606Q8WXB4 792 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 IRGQQ8WZA9 623 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 TTC17Q96AE7 1141 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 LRIG1Q96JA1 1093 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 ELF4Q99607 663 aaPredicted RBP9.37□□□□□ -0.91
SF3A1-206ENST00000471037 EIF3CQ99613 913 aaKnown RBP9.37□□□□□ -0.91
SF3A1-206ENST00000471037 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.37□□□□□ -0.91
SF3A1-206ENST00000471037 ACE2Q9BYF1 805 aaPredicted RBP9.37□□□□□ -0.91
SF3A1-206ENST00000471037 PABPC3Q9H361 631 aaKnown RBP9.37□□□□□ -0.91
SF3A1-206ENST00000471037 ACP6Q9NPH0 428 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 LUC7LQ9NQ29 371 aaKnown RBP9.37□□□□□ -0.91
SF3A1-206ENST00000471037 FTSJ1Q9UET6 329 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 ADAMTS1Q9UHI8 967 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 PCDHGC3Q9UN70 934 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 NCKAP1Q9Y2A7 1128 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 CEP83Q9Y592 693 aa9.37□□□□□ -0.91
SF3A1-206ENST00000471037 A0A087X0T9 212 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 FAM149AA5PLN7 773 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 GOLGA8CPA6NN73 597 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 DDX3XO00571 662 aaKnown RBP eCLIP9.36□□□□□ -0.91
SF3A1-206ENST00000471037 KCNK3O14649 394 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 YKT6O15498 198 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 ACSL4O60488 711 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 TBL1XO60907 577 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 SIN3BO75182 1162 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 LSM8O95777 96 aaKnown RBP9.36□□□□□ -0.91
SF3A1-206ENST00000471037 MMEP08473 750 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 C1SP09871 688 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 FAM228BP0C875 321 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 CDK4P11802 303 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 GZMAP12544 262 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 CHRNB2P17787 502 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 BRD2P25440 801 aaKnown RBP9.36□□□□□ -0.91
SF3A1-206ENST00000471037 SLC6A4P31645 630 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 SLC11A2P49281 568 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 GALCP54803 685 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 C21orf59P57076 290 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 ST8SIA6P61647 398 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 KRT83P78385 493 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 FMO1Q01740 532 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 CNGA2Q16280 664 aa9.36□□□□□ -0.91
SF3A1-206ENST00000471037 TAF3Q5VWG9 929 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms