RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PTGIRP43119 386 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 TNNT3P45378 269 aaPredicted RBP9.99□□□□□ -0.81
CCM2-204ENST00000470837 RENBPP51606 427 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 DRG2P55039 364 aaKnown RBP9.99□□□□□ -0.81
CCM2-204ENST00000470837 GEMIN4P57678 1058 aaKnown RBP9.99□□□□□ -0.81
CCM2-204ENST00000470837 BASP1P80723 227 aaKnown RBP9.99□□□□□ -0.81
CCM2-204ENST00000470837 DLX2Q07687 328 aaPredicted RBP9.99□□□□□ -0.81
CCM2-204ENST00000470837 SLC12A1Q13621 1099 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 PRPSAP1Q14558 356 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 CCDC85BQ15834 202 aaPredicted RBP9.99□□□□□ -0.81
CCM2-204ENST00000470837 RNF219Q5W0B1 726 aaPredicted RBP9.99□□□□□ -0.81
CCM2-204ENST00000470837 WDR93Q6P2C0 686 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 CEP128Q6ZU80 1094 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 B4GALNT4Q76KP1 1039 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 PID1Q7Z2X4 250 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 NETO2Q8NC67 525 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 SMRP1Q8NCR6 262 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 PPM1EQ8WY54 764 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 MYLIPQ8WY64 445 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.99□□□□□ -0.81
CCM2-204ENST00000470837 IRF7Q92985 503 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 HMCESQ96FZ2 354 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 P2RY11Q96G91 374 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 MSLNLQ96KJ4 702 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 TSGA13Q96PP4 275 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 PPP1R2P1Q96PQ5 205 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 XPO6Q96QU8 1125 aaKnown RBP9.99□□□□□ -0.81
CCM2-204ENST00000470837 CDX2Q99626 313 aaPredicted RBP9.99□□□□□ -0.81
CCM2-204ENST00000470837 HINFPQ9BQA5 517 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 C2orf49Q9BVC5 232 aaPredicted RBP9.99□□□□□ -0.81
CCM2-204ENST00000470837 TSPYL1Q9H0U9 437 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 C10orf88Q9H8K7 445 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 ANKZF1Q9H8Y5 726 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 DMGDHQ9UI17 866 aaKnown RBP9.99□□□□□ -0.81
CCM2-204ENST00000470837 ANAPC5Q9UJX4 755 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 VPS28Q9UK41 221 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 FAM50BQ9Y247 325 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 TBC1D30Q9Y2I9 924 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 SNX24Q9Y343 169 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 USP15Q9Y4E8 981 aaPredicted RBP9.99□□□□□ -0.81
CCM2-204ENST00000470837 TTLL3Q9Y4R7 772 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 WNT6Q9Y6F9 365 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 MYO7AQ13402 2215 aa9.99□□□□□ -0.81
CCM2-204ENST00000470837 GREB1Q4ZG55 1949 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 A0A0A0MRY4 1105 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 ESYT3A0FGR9 886 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 ZSCAN5CA6NGD5 496 aaPredicted RBP9.98□□□□□ -0.81
CCM2-204ENST00000470837 H3BQ06 376 aaPredicted RBP9.98□□□□□ -0.81
CCM2-204ENST00000470837 KCNK1O00180 336 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 CBX4O00257 560 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 DYNC1I1O14576 645 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 GCATO75600 419 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 ADH5P11766 374 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 LAMP2P13473 410 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 CCNB1P14635 433 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 FDFT1P37268 417 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 IRAK1P51617 712 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 SGSHP51688 502 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 CLCN6P51797 869 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 SARNPP82979 210 aaKnown RBP9.98□□□□□ -0.81
CCM2-204ENST00000470837 GAD2Q05329 585 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 IL10RBQ08334 325 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 ITKQ08881 620 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 SMAD4Q13485 552 aaKnown RBP9.98□□□□□ -0.81
CCM2-204ENST00000470837 SERINC3Q13530 473 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 ZNF235Q14590 738 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 NAA30Q147X3 362 aaPredicted RBP9.98□□□□□ -0.81
CCM2-204ENST00000470837 COL19A1Q14993 1142 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 BRD3Q15059 726 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 PREPLQ4J6C6 727 aaPredicted RBP9.98□□□□□ -0.81
CCM2-204ENST00000470837 LY6G5CQ5SRR4 150 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 TMCO4Q5TGY1 634 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 MARC1Q5VT66 337 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 IZUMO3Q5VZ72 239 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 AFMIDQ63HM1 303 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 DUPD1Q68J44 220 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 RETSATQ6NUM9 610 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 ARHGAP12Q8IWW6 846 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 CPA6Q8N4T0 437 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 DEFB123Q8N688 67 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 EIF1ADQ8N9N8 165 aaKnown RBP9.98□□□□□ -0.81
CCM2-204ENST00000470837 CCDC110Q8TBZ0 833 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 DEPDC1BQ8WUY9 529 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 HLA-CQ95604 372 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 ELSPBP1Q96BH3 223 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 RTP4Q96DX8 246 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 SPATA13Q96N96 652 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 ZNF599Q96NL3 588 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 MYADMQ96S97 322 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 EPC1Q9H2F5 836 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 POMKQ9H5K3 350 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 UBE2ZQ9H832 354 aaPredicted RBP9.98□□□□□ -0.81
CCM2-204ENST00000470837 USP29Q9HBJ7 922 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 GDF3Q9NR23 364 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 RAB6BQ9NRW1 208 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 NDFIP2Q9NV92 336 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 PLK2Q9NYY3 685 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 WHRNQ9P202 907 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 RSPH14Q9UHP6 348 aa9.98□□□□□ -0.81
CCM2-204ENST00000470837 CDH22Q9UJ99 828 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms