RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 POLD3Q15054 466 aaPredicted RBP11.53□□□□□ -0.56
SREBF1-209ENST00000470247 ITPRIPL2Q3MIP1 535 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 DNTTIP2Q5QJE6 756 aaKnown RBP11.53□□□□□ -0.56
SREBF1-209ENST00000470247 FAM182AQ5T1J6 154 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 C6orf118Q5T5N4 469 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 CCDC181Q5TID7 509 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 RNF219Q5W0B1 726 aaPredicted RBP11.53□□□□□ -0.56
SREBF1-209ENST00000470247 TMEM215Q68D42 235 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 TTC27Q6P3X3 843 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 ZNF783Q6ZMS7 281 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 APCDD1Q8J025 514 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 CPA6Q8N4T0 437 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 C12orf50Q8NA57 414 aaPredicted RBP11.53□□□□□ -0.56
SREBF1-209ENST00000470247 TTC13Q8NBP0 860 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 SPATA4Q8NEY3 305 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 MAIP1Q8WWC4 291 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 ATXN2LQ8WWM7 1075 aaKnown RBP11.53□□□□□ -0.56
SREBF1-209ENST00000470247 P3H4Q92791 437 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 NKD2Q969F2 451 aaPredicted RBP11.53□□□□□ -0.56
SREBF1-209ENST00000470247 TSGA13Q96PP4 275 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 ASB2Q96Q27 587 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 NAP1L3Q99457 506 aaPredicted RBP11.53□□□□□ -0.56
SREBF1-209ENST00000470247 LGMNQ99538 433 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 C10orf88Q9H8K7 445 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 USP29Q9HBJ7 922 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 RBM12Q9NTZ6 932 aaKnown RBP11.53□□□□□ -0.56
SREBF1-209ENST00000470247 ABCB8Q9NUT2 735 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 KIAA1522Q9P206 1035 aaPredicted RBP11.53□□□□□ -0.56
SREBF1-209ENST00000470247 COL6A3P12111 3177 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 COL4A3Q01955 1670 aa11.52□□□□□ -0.56
SREBF1-209ENST00000470247 J3KR12 359 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 SNAP91O60641 907 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 MAFKO60675 156 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 RBP3P10745 1247 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 VAV1P15498 845 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 GLDCP23378 1020 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 KCNJ1P48048 391 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 SOX9P48436 509 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 NUMBP49757 651 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 EIF3EP60228 445 aaKnown RBP11.52□□□□□ -0.57
SREBF1-209ENST00000470247 PPIDQ08752 370 aaKnown RBP11.52□□□□□ -0.57
SREBF1-209ENST00000470247 NR1H3Q13133 447 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 TDGQ13569 410 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 SNX1Q13596 522 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 CDH18Q13634 790 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 PRKD1Q15139 912 aaPredicted RBP11.52□□□□□ -0.57
SREBF1-209ENST00000470247 PLEKHG6Q3KR16 790 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 PARP15Q460N3 678 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 ADIPOR2Q86V24 386 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 ZC3H18Q86VM9 953 aaKnown RBP11.52□□□□□ -0.57
SREBF1-209ENST00000470247 LRRC49Q8IUZ0 686 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 SFTPA1Q8IWL2 248 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 LRRN4CLQ8ND94 238 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 MAGOHBQ96A72 148 aaKnown RBP11.52□□□□□ -0.57
SREBF1-209ENST00000470247 HDAC11Q96DB2 347 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 XPO6Q96QU8 1125 aaKnown RBP11.52□□□□□ -0.57
SREBF1-209ENST00000470247 FRMD8P1Q9BZ68 369 aaPredicted RBP11.52□□□□□ -0.57
SREBF1-209ENST00000470247 PDFQ9HBH1 243 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 FBRSL1Q9HCM7 1045 aaKnown RBP11.52□□□□□ -0.57
SREBF1-209ENST00000470247 CD320Q9NPF0 282 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 SLC2A4RGQ9NR83 387 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 IPO11Q9UI26 975 aaKnown RBP11.52□□□□□ -0.57
SREBF1-209ENST00000470247 DRG1Q9Y295 367 aaKnown RBP11.52□□□□□ -0.57
SREBF1-209ENST00000470247 SLC27A6Q9Y2P4 619 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 ACTL7AQ9Y615 435 aa11.52□□□□□ -0.57
SREBF1-209ENST00000470247 A0A0A0MRY4 1105 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 BCLAF3A2AJT9 711 aaKnown RBP11.51□□□□□ -0.57
SREBF1-209ENST00000470247 ANTXRLA6NF34 631 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 ARHGAP42A6NI28 874 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 HACD1B0YJ81 288 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 DFFAO00273 331 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 NCAM2O15394 837 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 KDELR3O43731 214 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 PRAMEF11O60813 436 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 PHF2O75151 1096 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 SRFP11831 508 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 PABPC1P11940 636 aaKnown RBP11.51□□□□□ -0.57
SREBF1-209ENST00000470247 MX2P20592 715 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 COILP38432 576 aaPredicted RBP11.51□□□□□ -0.57
SREBF1-209ENST00000470247 ARF5P84085 180 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 SLC12A1Q13621 1099 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 PDK1Q15118 436 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 KCTD19Q17RG1 926 aaPredicted RBP11.51□□□□□ -0.57
SREBF1-209ENST00000470247 GEN1Q17RS7 908 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 FUT11Q495W5 492 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 PITRM1Q5JRX3 1037 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 TXNDC11Q6PKC3 985 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 BZW1Q7L1Q6 419 aaKnown RBP11.51□□□□□ -0.57
SREBF1-209ENST00000470247 MAML1Q92585 1016 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 DNASE1L2Q92874 299 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 TTC17Q96AE7 1141 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 ZNF419Q96HQ0 510 aaPredicted RBP11.51□□□□□ -0.57
SREBF1-209ENST00000470247 QKIQ96PU8 341 aaKnown RBP eCLIP11.51□□□□□ -0.57
SREBF1-209ENST00000470247 CARD6Q9BX69 1037 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 BRD8Q9H0E9 1235 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 DDX47Q9H0S4 455 aaKnown RBP11.51□□□□□ -0.57
SREBF1-209ENST00000470247 HOMER3Q9NSC5 361 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 DNAJC17Q9NVM6 304 aaKnown RBP11.51□□□□□ -0.57
SREBF1-209ENST00000470247 GGA2Q9UJY4 613 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 HCN2Q9UL51 889 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms