RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 RPL6Q02878 288 aaKnown RBP14.9□□□□□ -0.02
COL27A1-203ENST00000468565 SLC12A1Q13621 1099 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 C2CD6Q53TS8 623 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 FSCBQ5H9T9 825 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 PITRM1Q5JRX3 1037 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 ACBD5Q5T8D3 534 aaPredicted RBP14.9□□□□□ -0.02
COL27A1-203ENST00000468565 FBXL22Q6P050 247 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 MMS22LQ6ZRQ5 1243 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 BNIPLQ7Z465 357 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 TMPRSS6Q8IU80 811 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 TMEFF1Q8IYR6 380 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 OR2T3Q8NH03 318 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 BAP1Q92560 729 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 PRCCQ92733 491 aaPredicted RBP14.9□□□□□ -0.02
COL27A1-203ENST00000468565 SYN2Q92777 582 aaPredicted RBP14.9□□□□□ -0.02
COL27A1-203ENST00000468565 TBCBQ99426 244 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 ITM2CQ9NQX7 267 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 SUN2Q9UH99 717 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 HS3ST4Q9Y661 456 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 CACNA1AO00555 2505 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 SLC30A4O14863 429 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 AKR1B10O60218 316 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 LCA5LO95447 670 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 CCDC172P0C7W6 258 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 FERP16591 822 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 TFE3P19532 575 aaPredicted RBP14.9□□□□□ -0.02
COL27A1-203ENST00000468565 EIF4A3P38919 411 aaKnown RBP14.9□□□□□ -0.02
COL27A1-203ENST00000468565 OXCT1P55809 520 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 GSCP56915 257 aaPredicted RBP14.9□□□□□ -0.02
COL27A1-203ENST00000468565 CENPCQ03188 943 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 DEUP1Q05D60 604 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 AUHQ13825 339 aaKnown RBP14.9□□□□□ -0.02
COL27A1-203ENST00000468565 BRD3Q15059 726 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 PLEKHG6Q3KR16 790 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 C5orf22Q49AR2 442 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 PEAR1Q5VY43 1037 aaPredicted RBP14.9□□□□□ -0.02
COL27A1-203ENST00000468565 LYSMD4Q5XG99 296 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 SIPA1Q96FS4 1042 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 PARD6BQ9BYG5 372 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 ARHGAP20Q9P2F6 1191 aa14.9□□□□□ -0.02
COL27A1-203ENST00000468565 SSU72P8A0A1W2PR75 194 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 ZRANB2O95218 330 aaKnown RBP eCLIP14.89□□□□□ -0.03
COL27A1-203ENST00000468565 IGLV3-19P01714 112 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 SRPRAP08240 638 aaKnown RBP14.89□□□□□ -0.03
COL27A1-203ENST00000468565 OXTRP30559 389 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 HOXD12P35452 270 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 PTGER3P43115 390 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 NSFP46459 744 aaKnown RBP14.89□□□□□ -0.03
COL27A1-203ENST00000468565 ATXN1P54253 815 aaKnown RBP14.89□□□□□ -0.03
COL27A1-203ENST00000468565 ST8SIA6P61647 398 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 SFMBT2Q5VUG0 894 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 TRNP1Q6NT89 227 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 DGLUCYQ7Z3D6 616 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 SYT12Q8IV01 421 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 IGSF8Q969P0 613 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 MYO19Q96H55 970 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 MRGPRX3Q96LB0 322 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 RPRD1AQ96P16 312 aaPredicted RBP14.89□□□□□ -0.03
COL27A1-203ENST00000468565 PCDHB18PQ96TA0 734 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 C11orf70Q9BRQ4 267 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 TKTL2Q9H0I9 626 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 SMOC1Q9H4F8 434 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 CD93Q9NPY3 652 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 METTL5Q9NRN9 209 aaKnown RBP14.89□□□□□ -0.03
COL27A1-203ENST00000468565 EVLQ9UI08 416 aaPredicted RBP14.89□□□□□ -0.03
COL27A1-203ENST00000468565 PCDHA13Q9Y5I0 950 aa14.89□□□□□ -0.03
COL27A1-203ENST00000468565 ADAMTS9Q9P2N4 1935 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 GDF9O60383 454 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 TUBBP07437 444 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 PLEKP08567 350 aaPredicted RBP14.88□□□□□ -0.03
COL27A1-203ENST00000468565 CD6P30203 668 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 PLK1P53350 603 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 FOXK2Q01167 660 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 CKAP4Q07065 602 aaKnown RBP14.88□□□□□ -0.03
COL27A1-203ENST00000468565 PTP4A2Q12974 167 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 CLEC16AQ2KHT3 1053 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 PAPD7Q5XG87 772 aaKnown RBP14.88□□□□□ -0.03
COL27A1-203ENST00000468565 ARMCX6Q7L4S7 300 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 PHF13Q86YI8 300 aaPredicted RBP14.88□□□□□ -0.03
COL27A1-203ENST00000468565 PIGKQ92643 395 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 AGPAT1Q99943 283 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 LACRTQ9GZZ8 138 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 ARFGAP3Q9NP61 516 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 PRSS16Q9NQE7 514 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 ANLNQ9NQW6 1124 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 WSB2Q9NYS7 404 aaPredicted RBP14.88□□□□□ -0.03
COL27A1-203ENST00000468565 VANGL2Q9ULK5 521 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 ERVW-1Q9UQF0 538 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 SAR1BQ9Y6B6 198 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 NUMA1Q14980 2115 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 FAM170AA1A519 330 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 RCCD1A6NED2 376 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 KHNYNO15037 678 aaKnown RBP14.88□□□□□ -0.03
COL27A1-203ENST00000468565 NDUFS2O75306 463 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 ENDOD1O94919 500 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 CALB1P05937 261 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 ACADMP11310 421 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 RDXP35241 583 aaKnown RBP14.88□□□□□ -0.03
COL27A1-203ENST00000468565 TPMTP51580 245 aa14.88□□□□□ -0.03
COL27A1-203ENST00000468565 ZBTB16Q05516 673 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms