RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 SUFUQ9UMX1 484 aa4.55□□□□□ -1.68
SMC4-208ENST00000467468 SLC12A4Q9UP95 1085 aa4.55□□□□□ -1.68
SMC4-208ENST00000467468 NAALADL1Q9UQQ1 740 aa4.55□□□□□ -1.68
SMC4-208ENST00000467468 ZNF804BA4D1E1 1349 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 CYP3A7-CYP3A51PA0A087WV96 503 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 GOLGA6L10A0A0M3HER8 536 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 FAM90A7PA6NKC0 464 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 SH2D7A6NKC9 451 aaPredicted RBP4.54□□□□□ -1.68
SMC4-208ENST00000467468 CGB1A6NKQ9 187 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 C3orf70A6NLC5 250 aaPredicted RBP4.54□□□□□ -1.68
SMC4-208ENST00000467468 FAM90A22PA8MWA6 464 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 FAM90A12PA8MX19 464 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 FAM90A23PA8MXZ1 464 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 TMEM232C9JQI7 657 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 PPP6CO00743 305 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 TNPO2O14787 897 aaKnown RBP4.54□□□□□ -1.68
SMC4-208ENST00000467468 TSPAN4O14817 238 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 AHCYL1O43865 530 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 RNF8O76064 485 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 MLYCDO95822 493 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 LATS1O95835 1130 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 WEE2P0C1S8 567 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 HSPA1AP0DMV8 641 aaKnown RBP4.54□□□□□ -1.68
SMC4-208ENST00000467468 HSPA1BP0DMV9 641 aaKnown RBP4.54□□□□□ -1.68
SMC4-208ENST00000467468 CYP2D6P10635 497 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 ACADMP11310 421 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 KELP23276 732 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 CYP3A7P24462 503 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 HOXD12P35452 270 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 IGHMBP2P38935 993 aaKnown RBP4.54□□□□□ -1.68
SMC4-208ENST00000467468 PSG6Q00889 435 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 LMAN2Q12907 356 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 TBCEQ15813 527 aaPredicted RBP4.54□□□□□ -1.68
SMC4-208ENST00000467468 RNASE12Q5GAN4 147 aaKnown RBP4.54□□□□□ -1.68
SMC4-208ENST00000467468 WDR93Q6P2C0 686 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 ZNF66Q6ZN08 573 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 BCDIN3DQ7Z5W3 292 aaKnown RBP4.54□□□□□ -1.68
SMC4-208ENST00000467468 PXKQ7Z7A4 578 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 NEK8Q86SG6 692 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 ADSSL1Q8N142 457 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 LSMEM1Q8N8F7 131 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 PNPLA1Q8N8W4 532 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 OR52L2PQ8NGH6 319 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 SMG7Q92540 1137 aaKnown RBP4.54□□□□□ -1.68
SMC4-208ENST00000467468 RITA1Q96K30 269 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 HS6ST2Q96MM7 605 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 CENPOQ9BU64 300 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 SLC29A3Q9BZD2 475 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 USP44Q9H0E7 712 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 CDCP1Q9H5V8 836 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 SAP30LQ9HAJ7 183 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 PDE11AQ9HCR9 933 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 BEX4Q9NWD9 120 aaPredicted RBP4.54□□□□□ -1.68
SMC4-208ENST00000467468 NKIRAS2Q9NYR9 191 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 MGAT4CQ9UBM8 478 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 TBC1D29Q9UFV1 150 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 VPS28Q9UK41 221 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 MAFFQ9ULX9 164 aa4.54□□□□□ -1.68
SMC4-208ENST00000467468 KDM3AQ9Y4C1 1321 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 GAGE10A6NGK3 116 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 DNAJC9-AS1A6NH13 148 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 GRM8O00222 908 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 CA12O43570 354 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 PRR35P0CG20 571 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 LAMP2P13473 410 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 IGFBP2P18065 325 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 MATN1P21941 496 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 RRM1P23921 792 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 PRKCHP24723 683 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 HOXD13P35453 343 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 ARL1P40616 181 aaPredicted RBP4.53□□□□□ -1.68
SMC4-208ENST00000467468 TXNL4AP83876 142 aaKnown RBP4.53□□□□□ -1.68
SMC4-208ENST00000467468 DEUP1Q05D60 604 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 CUL4AQ13619 759 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 CCDC96Q2M329 555 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 MTX3Q5HYI7 312 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 TMEM65Q6PI78 240 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 VSTM1Q6UX27 236 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 ATF7IPQ6VMQ6 1270 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 KRT77Q7Z794 578 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 CPLX4Q7Z7G2 160 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 RPAP2Q8IXW5 612 aaPredicted RBP4.53□□□□□ -1.68
SMC4-208ENST00000467468 ZNF366Q8N895 744 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 RFWD2Q8NHY2 731 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 CLEC4CQ8WTT0 213 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 SH3KBP1Q96B97 665 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 NSUN4Q96CB9 384 aaKnown RBP4.53□□□□□ -1.68
SMC4-208ENST00000467468 ELP4Q96EB1 424 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 FAM118BQ9BPY3 351 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 ITPAQ9BY32 194 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 CLPBQ9H078 707 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 SLC25A18Q9H1K4 315 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 MROH8Q9H579 483 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 SEMA4BQ9NPR2 832 aaPredicted RBP4.53□□□□□ -1.68
SMC4-208ENST00000467468 ZDHHC7Q9NXF8 308 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 CAMK2AQ9UQM7 478 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 PCDHB2Q9Y5E7 798 aa4.53□□□□□ -1.68
SMC4-208ENST00000467468 COPG1Q9Y678 874 aaKnown RBP4.53□□□□□ -1.68
SMC4-208ENST00000467468 GTPBP1O00178 669 aaKnown RBP4.52□□□□□ -1.69
SMC4-208ENST00000467468 PLOD3O60568 738 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms