RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 EBF3Q9H4W6 596 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 ECT2Q9H8V3 914 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 FBRSL1Q9HCM7 1045 aaKnown RBP5.84□□□□□ -1.47
PTCD3-207ENST00000467273 ERVK13-1Q9NX77 482 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 RGL1Q9NZL6 768 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 SAMD15Q9P1V8 674 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 GDAQ9Y2T3 454 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 USP9XQ93008 2570 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-207ENST00000467273 PTPN13Q12923 2485 aa5.84□□□□□ -1.48
PTCD3-207ENST00000467273 TRIP11Q15643 1979 aa5.84□□□□□ -1.48
PTCD3-207ENST00000467273 DENND4CQ5VZ89 1909 aa5.84□□□□□ -1.48
PTCD3-207ENST00000467273 ATG2BQ96BY7 2078 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 TRABD2BA6NFA1 517 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 RRP8O43159 456 aaKnown RBP5.83□□□□□ -1.48
PTCD3-207ENST00000467273 SLC37A4O43826 429 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 BAG4O95429 457 aaKnown RBP5.83□□□□□ -1.48
PTCD3-207ENST00000467273 VNN2O95498 520 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 C6P13671 934 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 GNSP15586 552 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 IFNAR1P17181 557 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 NAT1P18440 290 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 FLT3P36888 993 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 EIF2DP41214 584 aaKnown RBP5.83□□□□□ -1.48
PTCD3-207ENST00000467273 AARSP49588 968 aaKnown RBP eCLIP5.83□□□□□ -1.48
PTCD3-207ENST00000467273 POU5F1Q01860 360 aaKnown RBP5.83□□□□□ -1.48
PTCD3-207ENST00000467273 SMARCB1Q12824 385 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 STRN3Q13033 797 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 KRT32Q14532 448 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 EOGTQ5NDL2 527 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 ATF7IP2Q5U623 682 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 PIK3R6Q5UE93 754 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 CPZQ66K79 652 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 UBE2R2Q712K3 238 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-207ENST00000467273 USP37Q86T82 979 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 TPH2Q8IWU9 490 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 BLIDQ8IZY5 108 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 FBXL16Q8N461 479 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 ATL2Q8NHH9 583 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 PCDH19Q8TAB3 1148 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 C2orf15Q8WU43 125 aaKnown RBP5.83□□□□□ -1.48
PTCD3-207ENST00000467273 OSCP1Q8WVF1 389 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 USP13Q92995 863 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-207ENST00000467273 DYDC2Q96IM9 177 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 C8orf49Q96NF6 230 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 SLC46A2Q9BY10 475 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 LSG1Q9H089 658 aaKnown RBP5.83□□□□□ -1.48
PTCD3-207ENST00000467273 CXCL16Q9H2A7 254 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 TMEM206Q9H813 350 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 POLR3BQ9NW08 1133 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-207ENST00000467273 VPS54Q9P1Q0 977 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 PPARGC1AQ9UBK2 798 aaKnown RBP5.83□□□□□ -1.48
PTCD3-207ENST00000467273 MCM8Q9UJA3 840 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 FBXL7Q9UJT9 491 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 TNFSF13BQ9Y275 285 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 INVSQ9Y283 1065 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 NFE2L3Q9Y4A8 694 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 COL6A6A6NMZ7 2263 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 CEP192Q8TEP8 1941 aa5.83□□□□□ -1.48
PTCD3-207ENST00000467273 MGAQ8IWI9 3026 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 CITO14578 2027 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 ADAMTS9Q9P2N4 1935 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 TRBV23OR9-2A0A075B6M9 112 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 A0A1W2PQ27 194 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 A0A1W2PQ64 194 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 A0A1W2PQC6 194 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 MTMR11A4FU01 709 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 K7EQS6 105 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 ZNF217O75362 1048 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 CKMP06732 381 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 PDGFRBP09619 1106 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 CDK4P11802 303 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 HLA-EP13747 358 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 ARSAP15289 507 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 ZNF20P17024 532 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 TYMPP19971 482 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 ENDOUP21128 410 aaKnown RBP5.82□□□□□ -1.48
PTCD3-207ENST00000467273 LRPAP1P30533 357 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 EIF2S3P41091 472 aaKnown RBP5.82□□□□□ -1.48
PTCD3-207ENST00000467273 ZNF33AQ06730 810 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 CTTNQ14247 550 aaKnown RBP5.82□□□□□ -1.48
PTCD3-207ENST00000467273 MTF1Q14872 753 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 NR1I3Q14994 352 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 SMAD1Q15797 465 aaKnown RBP5.82□□□□□ -1.48
PTCD3-207ENST00000467273 TAF12Q16514 161 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 SYCP2LQ5T4T6 812 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 ICE2Q659A1 982 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 TRIM68Q6AZZ1 485 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 NCAPH2Q6IBW4 605 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 ARMCX5Q6P1M9 558 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 GPR155Q7Z3F1 870 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 NEK8Q86SG6 692 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 MON1AQ86VX9 555 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 ZC3H7AQ8IWR0 971 aaKnown RBP5.82□□□□□ -1.48
PTCD3-207ENST00000467273 PNPLA1Q8N8W4 532 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 IGSF22Q8N9C0 903 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 ENGASEQ8NFI3 743 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 DEPTORQ8TB45 409 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 MRPS31Q92665 395 aaKnown RBP5.82□□□□□ -1.48
PTCD3-207ENST00000467273 HAS1Q92839 578 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms