RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 CXADRP78310 365 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 RHDQ02161 417 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 SLC12A1Q13621 1099 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 CDH18Q13634 790 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 COBLL1Q53SF7 1204 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 FOXD4L5Q5VV16 416 aaPredicted RBP12.58□□□□□ -0.4
UBR4-211ENST00000467272 SYPL2Q5VXT5 272 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 TBC1D3GQ6DHY5 549 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 TBC1D3CQ6IPX1 549 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 CXorf57Q6NSI4 855 aaKnown RBP12.58□□□□□ -0.4
UBR4-211ENST00000467272 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.58□□□□□ -0.4
UBR4-211ENST00000467272 TAC4Q86UU9 113 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 COL27A1Q8IZC6 1860 aaPredicted RBP12.58□□□□□ -0.4
UBR4-211ENST00000467272 TBC1D3Q8IZP1 549 aaPredicted RBP12.58□□□□□ -0.4
UBR4-211ENST00000467272 FAM181AQ8N9Y4 354 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 LMO3Q8TAP4 145 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 FOXD4L4Q8WXT5 416 aaPredicted RBP12.58□□□□□ -0.4
UBR4-211ENST00000467272 SERPINB11Q96P15 392 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 CAAP1Q9H8G2 361 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 KLHL11Q9NVR0 708 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 NAALADL1Q9UQQ1 740 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 A0A1B0GVM2 712 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 PRAMEF26H0Y7S4 382 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 PIK3R2O00459 728 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 MCF2LO15068 1137 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 ALOX15BO15296 676 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 MAGEC1O60732 1142 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 IL1BP01584 269 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 GP1BAP07359 652 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 TBXAS1P24557 533 aaPredicted RBP12.57□□□□□ -0.4
UBR4-211ENST00000467272 GPD2P43304 727 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 UCNP55089 124 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 PCBP4P57723 403 aaKnown RBP12.57□□□□□ -0.4
UBR4-211ENST00000467272 KCNMA1Q12791 1236 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 CNTN1Q12860 1018 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 KRBA2Q6ZNG9 492 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 PRPF39Q86UA1 669 aaKnown RBP12.57□□□□□ -0.4
UBR4-211ENST00000467272 OR52K2Q8NGK3 314 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 CPNE5Q9HCH3 593 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 TJP2Q9UDY2 1190 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 CNTN6Q9UQ52 1028 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 CA5BQ9Y2D0 317 aa12.57□□□□□ -0.4
UBR4-211ENST00000467272 NYNRINQ9P2P1 1898 aaKnown RBP12.57□□□□□ -0.4
UBR4-211ENST00000467272 CETN3O15182 167 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 SDC3O75056 442 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 MOCS3O95396 460 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 CALCAP01258 141 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 EPB41P11171 864 aaKnown RBP12.56□□□□□ -0.4
UBR4-211ENST00000467272 TACR2P21452 398 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 SYKP43405 635 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 PMS1P54277 932 aaKnown RBP12.56□□□□□ -0.4
UBR4-211ENST00000467272 TMPRSS3P57727 454 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 YWHAEP62258 255 aaKnown RBP12.56□□□□□ -0.4
UBR4-211ENST00000467272 SULT2A1Q06520 285 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 STILQ15468 1287 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 C5orf22Q49AR2 442 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 ARTNQ5T4W7 220 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 PIP5KL1Q5T9C9 394 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 TMEM270Q6UE05 265 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 KDM7AQ6ZMT4 941 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 SMYD4Q8IYR2 804 aaPredicted RBP12.56□□□□□ -0.4
UBR4-211ENST00000467272 LGI2Q8N0V4 545 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 LSMEM2Q8N112 164 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 CCAR2Q8N163 923 aaKnown RBP12.56□□□□□ -0.4
UBR4-211ENST00000467272 SLC22A18ASQ8N1D0 253 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 STK32AQ8WU08 396 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 KAT5Q92993 513 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 IFT43Q96FT9 208 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 PRR11Q96HE9 360 aaPredicted RBP12.56□□□□□ -0.4
UBR4-211ENST00000467272 BTN2A3PQ96KV6 586 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 SLC4A5Q9BY07 1137 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 DPH1Q9BZG8 443 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 GOLPH3LQ9H4A5 285 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 POLR1BQ9H9Y6 1135 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 PREBQ9HCU5 417 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 LRRK2Q5S007 2527 aa12.56□□□□□ -0.4
UBR4-211ENST00000467272 TEX15Q9BXT5 2789 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 TYW5A2RUC4 315 aaKnown RBP12.55□□□□□ -0.4
UBR4-211ENST00000467272 B8ZZF3 427 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 RNF103O00237 685 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 PIAS2O75928 621 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 MPOP05164 745 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 CTSLP07711 333 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 BRD2P25440 801 aaKnown RBP12.55□□□□□ -0.4
UBR4-211ENST00000467272 MAT2AP31153 395 aaKnown RBP12.55□□□□□ -0.4
UBR4-211ENST00000467272 PITX1P78337 314 aaPredicted RBP12.55□□□□□ -0.4
UBR4-211ENST00000467272 STAT4Q14765 748 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 MEA1Q16626 185 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 ZNF284Q2VY69 593 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 SETMARQ53H47 684 aaPredicted RBP12.55□□□□□ -0.4
UBR4-211ENST00000467272 ZC3H12AQ5D1E8 599 aaKnown RBP12.55□□□□□ -0.4
UBR4-211ENST00000467272 RAP1GAP2Q684P5 730 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 NEK5Q6P3R8 708 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 ABI3BPQ7Z7G0 1075 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 TMEM110Q86TL2 294 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 SPATA20Q8TB22 786 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 KLHDC7BQ96G42 594 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 FEM1AQ9BSK4 669 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 USP29Q9HBJ7 922 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 NLGN3Q9NZ94 848 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms