RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 ALDH7A1P49419 539 aaKnown RBP13.85□□□□□ -0.19
UBE4B-206ENST00000466379 NEK3P51956 506 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 SLC18A2Q05940 514 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 ALFQ53S48 1182 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 RAP1GAP2Q684P5 730 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 CCDC121Q6ZUS5 278 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 LRRC8CQ8TDW0 803 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 ALKBH8Q96BT7 664 aaKnown RBP13.85□□□□□ -0.19
UBE4B-206ENST00000466379 VWCEQ96DN2 955 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 PITPNM3Q9BZ71 974 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 CWH43Q9H720 699 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 CASS4Q9NQ75 786 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 TLR8Q9NR97 1041 aaKnown RBP13.85□□□□□ -0.19
UBE4B-206ENST00000466379 MARCH2Q9P0N8 246 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 PSAT1Q9Y617 370 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 RPS6KL1Q9Y6S9 549 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 ATXN2Q99700 1313 aaKnown RBP13.84□□□□□ -0.19
UBE4B-206ENST00000466379 CCDC78A2IDD5 438 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 SLC38A8A6NNN8 435 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 RFPL1O75677 317 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 ALDH1A2O94788 518 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 MT-CYBP00156 380 aaPredicted RBP13.84□□□□□ -0.19
UBE4B-206ENST00000466379 CCNCP24863 283 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 OR1D2P34982 312 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 NIPAL4Q0D2K0 466 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 SPATA21Q7Z572 469 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 CIR1Q86X95 450 aaPredicted RBP13.84□□□□□ -0.19
UBE4B-206ENST00000466379 ANKS4BQ8N8V4 417 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 IGSF8Q969P0 613 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 ZNF669Q96BR6 464 aaPredicted RBP13.84□□□□□ -0.19
UBE4B-206ENST00000466379 VAT1Q99536 393 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 NOL6Q9H6R4 1146 aaKnown RBP13.84□□□□□ -0.19
UBE4B-206ENST00000466379 USP15Q9Y4E8 981 aaPredicted RBP13.84□□□□□ -0.19
UBE4B-206ENST00000466379 ITIH4Q14624 930 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 RASSF3Q86WH2 238 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 ZNF683Q8IZ20 524 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 TTC17Q96AE7 1141 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 MYEOVQ96EZ4 313 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 SPATA17Q96L03 361 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 C1orf74Q96LT6 269 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 TSGA13Q96PP4 275 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 SLC13A1Q9BZW2 595 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 PCMTD2Q9NV79 361 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 CLIC5Q9NZA1 410 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 PHTF1Q9UMS5 762 aa13.84□□□□□ -0.19
UBE4B-206ENST00000466379 COPEO14579 308 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 HGSO14964 777 aaPredicted RBP13.83□□□□□ -0.2
UBE4B-206ENST00000466379 MATN3O15232 486 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 TM9SF1O15321 606 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 ZNF189O75820 626 aaPredicted RBP13.83□□□□□ -0.2
UBE4B-206ENST00000466379 TOP3BO95985 862 aaKnown RBP13.83□□□□□ -0.2
UBE4B-206ENST00000466379 HLA-DQB2P05538 268 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 HTR7P34969 479 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 IKBKEQ14164 716 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 PRPSAP1Q14558 356 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 TRIP4Q15650 581 aaPredicted RBP13.83□□□□□ -0.2
UBE4B-206ENST00000466379 SPOUT1Q5T280 376 aaKnown RBP13.83□□□□□ -0.2
UBE4B-206ENST00000466379 AFMIDQ63HM1 303 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 MARK2Q7KZI7 788 aaKnown RBP13.83□□□□□ -0.2
UBE4B-206ENST00000466379 YTHDF3Q7Z739 585 aaKnown RBP13.83□□□□□ -0.2
UBE4B-206ENST00000466379 ZNF276Q8N554 614 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 ATP6V0D2Q8N8Y2 350 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 CCT6BQ92526 530 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 ZNF75CPQ92670 426 aaPredicted RBP13.83□□□□□ -0.2
UBE4B-206ENST00000466379 SRPK1Q96SB4 655 aaKnown RBP13.83□□□□□ -0.2
UBE4B-206ENST00000466379 BEGAINQ9BUH8 593 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 ABCF3Q9NUQ8 709 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 BFARQ9NZS9 450 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 COL4A6Q14031 1691 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 CCT8L1PA6NM43 557 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 TLR5O60602 858 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 KRT38O76015 456 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 POLBP06746 335 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 SLC2A3P11169 496 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 RPL10AP62906 217 aaKnown RBP13.83□□□□□ -0.2
UBE4B-206ENST00000466379 NRG1Q02297 640 aaPredicted RBP13.83□□□□□ -0.2
UBE4B-206ENST00000466379 USP41Q3LFD5 358 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 LGSNQ5TDP6 509 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 FBXL22Q6P050 247 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 PACS1Q6VY07 963 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 KDELC2Q7Z4H8 507 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 LZTR1Q8N653 840 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 IPMKQ8NFU5 416 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 PTPRN2Q92932 1015 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 MFSD3Q96ES6 412 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 HMCESQ96FZ2 354 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 IGSF21Q96ID5 467 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 IL12RB2Q99665 862 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 ZYG11BQ9C0D3 744 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 LRRC40Q9H9A6 602 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 GLOD4Q9HC38 313 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 PRDM5Q9NQX1 630 aaPredicted RBP13.83□□□□□ -0.2
UBE4B-206ENST00000466379 CHRAC1Q9NRG0 131 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 TMEM39AQ9NV64 488 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 RBM22Q9NW64 420 aaKnown RBP eCLIP13.83□□□□□ -0.2
UBE4B-206ENST00000466379 MTRRQ9UBK8 725 aa13.83□□□□□ -0.2
UBE4B-206ENST00000466379 ERI2A8K979 691 aaKnown RBP13.82□□□□□ -0.2
UBE4B-206ENST00000466379 J3KR12 359 aa13.82□□□□□ -0.2
UBE4B-206ENST00000466379 SEC24AO95486 1093 aa13.82□□□□□ -0.2
UBE4B-206ENST00000466379 ETV4P43268 484 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms