RNA–Protein interactions for RNA: ENST00000465937.1

LIMK2-207, Transcript of LIM domain kinase 2, humanhuman

TSL 3

Gene LIMK2, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-207ENST00000465937 TMC6Q7Z403 805 aa13.67□□□□□ -0.22
LIMK2-207ENST00000465937 SLFN11Q7Z7L1 901 aa13.67□□□□□ -0.22
LIMK2-207ENST00000465937 KIAA2013Q8IYS2 634 aa13.67□□□□□ -0.22
LIMK2-207ENST00000465937 PRCCQ92733 491 aaPredicted RBP13.67□□□□□ -0.22
LIMK2-207ENST00000465937 ERLEC1Q96DZ1 483 aa13.67□□□□□ -0.22
LIMK2-207ENST00000465937 TRIM11Q96F44 468 aa13.67□□□□□ -0.22
LIMK2-207ENST00000465937 FAM129BQ96TA1 746 aa13.67□□□□□ -0.22
LIMK2-207ENST00000465937 TRIM7Q9C029 511 aa13.67□□□□□ -0.22
LIMK2-207ENST00000465937 ARRDC1-AS1Q9H2J1 176 aa13.67□□□□□ -0.22
LIMK2-207ENST00000465937 MTG2Q9H4K7 406 aa13.67□□□□□ -0.22
LIMK2-207ENST00000465937 TMEM248Q9NWD8 314 aa13.67□□□□□ -0.22
LIMK2-207ENST00000465937 CNOT8Q9UFF9 292 aaKnown RBP13.67□□□□□ -0.22
LIMK2-207ENST00000465937 HS3ST2Q9Y278 367 aa13.67□□□□□ -0.22
LIMK2-207ENST00000465937 DCHS1Q96JQ0 3298 aa13.67□□□□□ -0.22
LIMK2-207ENST00000465937 EDDM13A0A1B0GTR0 161 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 SSU72P8A0A1W2PR75 194 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 WASH4PA8MWX3 477 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 ATMINO43313 823 aaPredicted RBP13.66□□□□□ -0.22
LIMK2-207ENST00000465937 FOXD2O60548 495 aaPredicted RBP13.66□□□□□ -0.22
LIMK2-207ENST00000465937 SRGAP2O75044 1071 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 CYP1A2P05177 515 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 RHOQP17081 205 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 CD6P30203 668 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 MPLP40238 635 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 PTGER3P43115 390 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 STK19P49842 368 aaPredicted RBP13.66□□□□□ -0.22
LIMK2-207ENST00000465937 ST8SIA6P61647 398 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 TDRD12Q587J7 1177 aaKnown RBP13.66□□□□□ -0.22
LIMK2-207ENST00000465937 C6orf118Q5T5N4 469 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 KIAA1324Q6UXG2 1013 aaKnown RBP13.66□□□□□ -0.22
LIMK2-207ENST00000465937 SLC41A1Q8IVJ1 513 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 DCAF4L2Q8NA75 395 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 OR8K1Q8NGG5 319 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 FAM131CQ96AQ9 280 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 RPL10LQ96L21 214 aaKnown RBP13.66□□□□□ -0.22
LIMK2-207ENST00000465937 ACE2Q9BYF1 805 aaPredicted RBP13.66□□□□□ -0.22
LIMK2-207ENST00000465937 NDFIP2Q9NV92 336 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 CYP8B1Q9UNU6 501 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 SCINQ9Y6U3 715 aa13.66□□□□□ -0.22
LIMK2-207ENST00000465937 CACNA1EQ15878 2313 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 NYNRINQ9P2P1 1898 aaKnown RBP13.65□□□□□ -0.22
LIMK2-207ENST00000465937 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 ANKRD62A6NC57 917 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 CD160O95971 181 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 RHOCP08134 193 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 OXTRP30559 389 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 OR1E1P30953 314 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 HOXD12P35452 270 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 MAPKAPK2P49137 400 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 LMNB2Q03252 620 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 ACAP1Q15027 740 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 ZNF776Q68DI1 518 aaPredicted RBP13.65□□□□□ -0.22
LIMK2-207ENST00000465937 ALKBH5Q6P6C2 394 aaKnown RBP13.65□□□□□ -0.22
LIMK2-207ENST00000465937 PRR23CQ6ZRP0 262 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 TFAP2DQ7Z6R9 452 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 VPS36Q86VN1 386 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 TMEFF1Q8IYR6 380 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 PYROXD2Q8N2H3 581 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 SH2D3CQ8N5H7 860 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 CADM4Q8NFZ8 388 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 DNASE2BQ8WZ79 361 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 ZNF653Q96CK0 615 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 HINFPQ9BQA5 517 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 PCED1AQ9H1Q7 454 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 MRPL47Q9HD33 250 aaKnown RBP13.65□□□□□ -0.22
LIMK2-207ENST00000465937 VPS45Q9NRW7 570 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 DLL3Q9NYJ7 618 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 VPS51Q9UID3 782 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 VPS28Q9UK41 221 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 PILRBQ9UKJ0 227 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 SCML1Q9UN30 329 aa13.65□□□□□ -0.22
LIMK2-207ENST00000465937 PRR5-ARHGAP8B1AHC4 643 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 EIF3CLB5ME19 914 aaKnown RBP13.64□□□□□ -0.23
LIMK2-207ENST00000465937 MAP3K13O43283 966 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 SNAP91O60641 907 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 LRCH4O75427 683 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 ZNF821O75541 412 aaPredicted RBP13.64□□□□□ -0.23
LIMK2-207ENST00000465937 MT-CO1P00395 513 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 SRCP12931 536 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 VAV1P15498 845 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 PSMA2P25787 234 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 HTR7P34969 479 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 PCK1P35558 622 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 EIF4A3P38919 411 aaKnown RBP13.64□□□□□ -0.23
LIMK2-207ENST00000465937 KRT83P78385 493 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 ARHGAP8P85298 464 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 RPL6Q02878 288 aaKnown RBP13.64□□□□□ -0.23
LIMK2-207ENST00000465937 GNA12Q03113 381 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 ZNF33AQ06730 810 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 SLC20A2Q08357 652 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 ELAVL3Q14576 367 aaKnown RBP13.64□□□□□ -0.23
LIMK2-207ENST00000465937 DLG2Q15700 870 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 USP30Q70CQ3 517 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 GAS2L3Q86XJ1 694 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 SYT12Q8IV01 421 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 PSTKQ8IV42 348 aaKnown RBP13.64□□□□□ -0.23
LIMK2-207ENST00000465937 NIPA2Q8N8Q9 360 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 OR7D4Q8NG98 312 aa13.64□□□□□ -0.23
LIMK2-207ENST00000465937 ARHGEF2Q92974 986 aaKnown RBP13.64□□□□□ -0.23
LIMK2-207ENST00000465937 TBC1D31Q96DN5 1066 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms