RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 CYP2S1Q96SQ9 504 aa14.29□□□□□ -0.12
HDAC6-215ENST00000465457 TBCBQ99426 244 aa14.29□□□□□ -0.12
HDAC6-215ENST00000465457 SYT15Q9BQS2 421 aa14.29□□□□□ -0.12
HDAC6-215ENST00000465457 DUSP16Q9BY84 665 aa14.29□□□□□ -0.12
HDAC6-215ENST00000465457 OXCT2Q9BYC2 517 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-215ENST00000465457 UBXN6Q9BZV1 441 aa14.29□□□□□ -0.12
HDAC6-215ENST00000465457 DPEP3Q9H4B8 488 aa14.29□□□□□ -0.12
HDAC6-215ENST00000465457 KIF9Q9HAQ2 790 aa14.29□□□□□ -0.12
HDAC6-215ENST00000465457 TMLHEQ9NVH6 421 aa14.29□□□□□ -0.12
HDAC6-215ENST00000465457 DUS2Q9NX74 493 aaKnown RBP14.29□□□□□ -0.12
HDAC6-215ENST00000465457 DDX43Q9NXZ2 648 aaKnown RBP14.29□□□□□ -0.12
HDAC6-215ENST00000465457 ABI2Q9NYB9 513 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-215ENST00000465457 PILRBQ9UKJ0 227 aa14.29□□□□□ -0.12
HDAC6-215ENST00000465457 MMP17Q9ULZ9 603 aa14.29□□□□□ -0.12
HDAC6-215ENST00000465457 MAGED2Q9UNF1 606 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-215ENST00000465457 NME7Q9Y5B8 376 aa14.29□□□□□ -0.12
HDAC6-215ENST00000465457 CFAP46Q8IYW2 2715 aa14.29□□□□□ -0.12
HDAC6-215ENST00000465457 LRRD1A4D1F6 860 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 UPK3BL1B0FP48 263 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 UPK3BL2E5RIL1 263 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 SASH3O75995 380 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 FBXO21O94952 628 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 FAM200BP0CF97 657 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 MYBL2P10244 700 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 HAPLN1P10915 354 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-215ENST00000465457 PDGFRAP16234 1089 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 LMO2P25791 158 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 ADORA2BP29275 332 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 PTPN9P43378 593 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 CARSP49589 748 aaKnown RBP14.28□□□□□ -0.12
HDAC6-215ENST00000465457 HLTFQ14527 1009 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC6-215ENST00000465457 CCDC142Q17RM4 750 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 SPDYCQ5MJ68 293 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 PEAR1Q5VY43 1037 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-215ENST00000465457 WSCD1Q658N2 575 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 DUPD1Q68J44 220 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 AADACL2Q6P093 401 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 SPOCD1Q6ZMY3 1216 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 SND1Q7KZF4 910 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC6-215ENST00000465457 LPCAT2Q7L5N7 544 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 ADAT2Q7Z6V5 191 aaKnown RBP14.28□□□□□ -0.12
HDAC6-215ENST00000465457 C11orf74Q86VG3 221 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 MARCH9Q86YJ5 346 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 MINDY1Q8N5J2 469 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 ALLCQ8N6M5 410 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 OSCP1Q8WVF1 389 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 TEKT4Q8WW24 435 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 ACBD6Q9BR61 282 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 TSPYL1Q9H0U9 437 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 LINC00597Q9H2U6 94 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 HSFX1Q9UBD0 423 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 TJP2Q9UDY2 1190 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 NFU1Q9UMS0 254 aa14.28□□□□□ -0.12
HDAC6-215ENST00000465457 ZNF487B1APH4 448 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 H0Y626 953 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 SGK1O00141 431 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 PRPSAP2O60256 369 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 HSF2BPO75031 334 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 C1QL1O75973 258 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 TRIM16O95361 564 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 CCDC130P13994 396 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 GJC1P36383 396 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 PTGIRP43119 386 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 RGS7P49802 495 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 CAV1Q03135 178 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 TAF12Q16514 161 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 TAZQ16635 292 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 MAP7D1Q3KQU3 841 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 BOLA3Q53S33 107 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 LYSMD4Q5XG99 296 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 MON1AQ86VX9 555 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 OSTM1Q86WC4 334 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 MAP7D3Q8IWC1 876 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 FUKQ8N0W3 1084 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 THEM5Q8N1Q8 247 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 BBOF1Q8ND07 529 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 ATL2Q8NHH9 583 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 RXFP2Q8WXD0 754 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 MED10Q9BTT4 135 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 TRIM62Q9BVG3 475 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 DCLK3Q9C098 648 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 CCDC86Q9H6F5 360 aaKnown RBP14.27□□□□□ -0.13
HDAC6-215ENST00000465457 CAPN10Q9HC96 672 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 TRPC7Q9HCX4 862 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 CACNA2D2Q9NY47 1150 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 MTRF1LQ9UGC7 380 aaKnown RBP14.27□□□□□ -0.13
HDAC6-215ENST00000465457 HPCAL4Q9UM19 191 aa14.27□□□□□ -0.13
HDAC6-215ENST00000465457 ZNF462Q96JM2 2506 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 hCG_1818297A0A087WSY0 165 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 ESYT3A0FGR9 886 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 SCAMP3O14828 347 aaKnown RBP14.26□□□□□ -0.13
HDAC6-215ENST00000465457 PAPSS1O43252 624 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-215ENST00000465457 SH3BP5O60239 455 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 FTH1P19P0C7X4 201 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 MIPP30301 263 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 HSPA9P38646 679 aaKnown RBP14.26□□□□□ -0.13
HDAC6-215ENST00000465457 CDKN2BP42772 138 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 IFNAR2P48551 515 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 TUFMP49411 452 aaKnown RBP14.26□□□□□ -0.13
HDAC6-215ENST00000465457 ZXDBP98169 803 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms