RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 COQ6Q9Y2Z9 468 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 SRPRBQ9Y5M8 271 aaKnown RBP6.17□□□□□ -1.42
SSBP1-204ENST00000465167 SNX9Q9Y5X1 595 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 CLIC4Q9Y696 253 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 STYXL1Q9Y6J8 313 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 ATP8B3O60423 1300 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 OBSL1O75147 1896 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 HELZP42694 1942 aaKnown RBP6.17□□□□□ -1.42
SSBP1-204ENST00000465167 GOLGA8IPA6NC78 632 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 ZNF233A6NK53 670 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 GOLGA8JA6NMD2 632 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 NOTOA8MTQ0 251 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 TISP43B9A030 160 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 MYO1CO00159 1063 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 RPP40O75818 363 aaKnown RBP6.16□□□□□ -1.42
SSBP1-204ENST00000465167 RHOBTB1O94844 696 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 VNN2O95498 520 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 PRAMEF12O95522 483 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 NFATC1O95644 943 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 ATF6P18850 670 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 DRD1P21728 446 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 CDKN1CP49918 316 aaPredicted RBP6.16□□□□□ -1.42
SSBP1-204ENST00000465167 CDR1P51861 262 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 HK2P52789 917 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 ATXN1P54253 815 aaKnown RBP6.16□□□□□ -1.42
SSBP1-204ENST00000465167 TNNC1P63316 161 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 ASIC1P78348 528 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 KRT85P78386 507 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 CHRNEQ04844 493 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 GRIN1Q05586 938 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 FZD5Q13467 585 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 ZNF268Q14587 947 aaPredicted RBP6.16□□□□□ -1.42
SSBP1-204ENST00000465167 MTF1Q14872 753 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 CSRP2Q16527 193 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 ZSCAN26Q16670 478 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 Q6ZS52 159 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 OVCH1Q7RTY7 1134 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 CACNA2D4Q7Z3S7 1137 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 SRLQ86TD4 932 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 MON1AQ86VX9 555 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 SPPL2CQ8IUH8 684 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 EFCAB13Q8IY85 973 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 PDZD8Q8NEN9 1154 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 PLEKHO2Q8TD55 490 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 CCDC120Q96HB5 630 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 FUBP3Q96I24 572 aaKnown RBP eCLIP6.16□□□□□ -1.42
SSBP1-204ENST00000465167 ZNF396Q96N95 335 aaPredicted RBP6.16□□□□□ -1.42
SSBP1-204ENST00000465167 P2RY13Q9BPV8 354 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 JAM3Q9BX67 310 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 MTMR12Q9C0I1 747 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 SNX25Q9H3E2 840 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 CUEDC2Q9H467 287 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 EBF3Q9H4W6 596 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 PCIF1Q9H4Z3 704 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 SEMA4GQ9NTN9 838 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 DUS2Q9NX74 493 aaKnown RBP6.16□□□□□ -1.42
SSBP1-204ENST00000465167 DDX56Q9NY93 547 aaKnown RBP6.16□□□□□ -1.42
SSBP1-204ENST00000465167 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.16□□□□□ -1.42
SSBP1-204ENST00000465167 MCM8Q9UJA3 840 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 CDH9Q9ULB4 789 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.16□□□□□ -1.42
SSBP1-204ENST00000465167 X6R8D5 127 aa6.16□□□□□ -1.42
SSBP1-204ENST00000465167 GREB1Q4ZG55 1949 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 GOLGA6L9A6NEM1 432 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 MYMKA6NI61 221 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 CBX4O00257 560 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 SLC9A3R1O14745 358 aaPredicted RBP6.15□□□□□ -1.42
SSBP1-204ENST00000465167 SLC30A4O14863 429 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 GSTA4O15217 222 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 EIF3DO15371 548 aaKnown RBP eCLIP6.15□□□□□ -1.42
SSBP1-204ENST00000465167 STX6O43752 255 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 FUCA1P04066 466 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 PNMA6AP0CW24 399 aaPredicted RBP6.15□□□□□ -1.42
SSBP1-204ENST00000465167 PYGMP11217 842 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 TDGF1P13385 188 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 PFKLP17858 780 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 TNNI1P19237 187 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 ACAT1P24752 427 aaKnown RBP6.15□□□□□ -1.42
SSBP1-204ENST00000465167 CYP2F1P24903 491 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 HOXA6P31267 233 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 PPP3CCP48454 512 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 MVKQ03426 396 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 TRPC3Q13507 836 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 SLC14A2Q15849 920 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 PREPLQ4J6C6 727 aaPredicted RBP6.15□□□□□ -1.42
SSBP1-204ENST00000465167 TMEM177Q53S58 311 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 TMEM196Q5HYL7 178 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 SDHAF4Q5VUM1 108 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 LMBRD2Q68DH5 695 aaPredicted RBP6.15□□□□□ -1.42
SSBP1-204ENST00000465167 TXNDC8Q6A555 127 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 TRIM68Q6AZZ1 485 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 GALNT18Q6P9A2 607 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 KRBA2Q6ZNG9 492 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 CCDC186Q7Z3E2 898 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 C11orf74Q86VG3 221 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 C17orf53Q8N3J3 647 aaPredicted RBP6.15□□□□□ -1.42
SSBP1-204ENST00000465167 CAMKK1Q8N5S9 505 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 PDILTQ8N807 584 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 SPC24Q8NBT2 197 aa6.15□□□□□ -1.42
SSBP1-204ENST00000465167 STKLD1Q8NE28 680 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms