RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 DEUP1Q05D60 604 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 ELAVL3Q14576 367 aaKnown RBP19.39■□□□□ 0.69
SF3A1-205ENST00000463818 SUZ12Q15022 739 aaKnown RBP19.39■□□□□ 0.69
SF3A1-205ENST00000463818 ACCSLQ4AC99 568 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 C2CD6Q53TS8 623 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 KCNT1Q5JUK3 1230 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 BRMS1LQ5PSV4 323 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 XYLT1Q86Y38 959 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 PNPLA1Q8N8W4 532 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 OR14C36Q8NHC7 312 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 RHBDD1Q8TEB9 315 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 CPA5Q8WXQ8 436 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 GATA6Q92908 595 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 PGAP3Q96FM1 320 aaPredicted RBP19.39■□□□□ 0.69
SF3A1-205ENST00000463818 TBCBQ99426 244 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 SLC25A13Q9UJS0 675 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 VPS28Q9UK41 221 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 TBC1D30Q9Y2I9 924 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 KMT2BQ9UMN6 2715 aaPredicted RBP19.38■□□□□ 0.69
SF3A1-205ENST00000463818 F8VZ95 297 aa19.38■□□□□ 0.69
SF3A1-205ENST00000463818 GOLGA8SH3BPF8 625 aa19.38■□□□□ 0.69
SF3A1-205ENST00000463818 I6L893 689 aaPredicted RBP19.38■□□□□ 0.69
SF3A1-205ENST00000463818 ATP9BO43861 1147 aa19.38■□□□□ 0.69
SF3A1-205ENST00000463818 LSM8O95777 96 aaKnown RBP19.38■□□□□ 0.69
SF3A1-205ENST00000463818 MMEP08473 750 aa19.38■□□□□ 0.69
SF3A1-205ENST00000463818 FTH1P19P0C7X4 201 aa19.38■□□□□ 0.69
SF3A1-205ENST00000463818 DLG2Q15700 870 aa19.38■□□□□ 0.69
SF3A1-205ENST00000463818 SLC25A52Q3SY17 297 aa19.38■□□□□ 0.69
SF3A1-205ENST00000463818 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.38■□□□□ 0.69
SF3A1-205ENST00000463818 RAB44Q7Z6P3 723 aaPredicted RBP19.38■□□□□ 0.69
SF3A1-205ENST00000463818 ADAT2Q7Z6V5 191 aaKnown RBP19.38■□□□□ 0.69
SF3A1-205ENST00000463818 SLCO6A1Q86UG4 719 aa19.38■□□□□ 0.69
SF3A1-205ENST00000463818 KDF1Q8NAX2 398 aaPredicted RBP19.38■□□□□ 0.69
SF3A1-205ENST00000463818 SPAG5Q96R06 1193 aa19.38■□□□□ 0.69
SF3A1-205ENST00000463818 DRGXA6NNA5 263 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 H0Y8X5 98 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 PLK4O00444 970 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 ZNF18P17022 549 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 CTSKP43235 329 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 KLK7P49862 253 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 CCR5P51681 352 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 C21orf59P57076 290 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 KRT31Q15323 416 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 ALFQ53S48 1182 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 GLRX5Q86SX6 157 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 ADAMTS14Q8WXS8 1223 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 OR8D1Q8WZ84 308 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 C1orf74Q96LT6 269 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 SLC6A18Q96N87 628 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 MUC3BQ9H195 1237 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 GANQ9H2C0 597 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 TMPRSS4Q9NRS4 437 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 TMEM51Q9NW97 253 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 TMEM59LQ9UK28 342 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 SARDHQ9UL12 918 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 APOBEC2Q9Y235 224 aaKnown RBP19.37■□□□□ 0.69
SF3A1-205ENST00000463818 PAXBP1Q9Y5B6 917 aa19.37■□□□□ 0.69
SF3A1-205ENST00000463818 TBC1D3DA0A087WVF3 549 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 TBC1D3IA0A087WXS9 549 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 TBC1D3EA0A087X179 549 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 TBC1D3KA0A087X1G2 549 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 FAM221BA6H8Z2 402 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 TBC1D3FA6NER0 549 aaPredicted RBP19.36■□□□□ 0.69
SF3A1-205ENST00000463818 C10orf142B7Z368 130 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 TBC1D3LB9A6J9 549 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 VILLO15195 856 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 FLRT2O43155 660 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 GFPT2O94808 682 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 TBC1D3HP0C7X1 549 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 DRD3P35462 400 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 FLT3P36888 993 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 METAP1P53582 386 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 ADPRHP54922 357 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 NOMO3P69849 1222 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 CDKAL1Q5VV42 579 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 NAA35Q5VZE5 725 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 TBC1D3GQ6DHY5 549 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 TBC1D3CQ6IPX1 549 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 LRRC31Q6UY01 552 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 DSG4Q86SJ6 1040 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 ZNF683Q8IZ20 524 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 TBC1D3Q8IZP1 549 aaPredicted RBP19.36■□□□□ 0.69
SF3A1-205ENST00000463818 SH2D3CQ8N5H7 860 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 MSANTD4Q8NCY6 345 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 GPT2Q8TD30 523 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 EPS8L1Q8TE68 723 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 ACE2Q9BYF1 805 aaPredicted RBP19.36■□□□□ 0.69
SF3A1-205ENST00000463818 ZMIZ1Q9ULJ6 1067 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 PPM1HQ9ULR3 514 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 BTBD3Q9Y2F9 522 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 USP24Q9UPU5 2620 aa19.36■□□□□ 0.69
SF3A1-205ENST00000463818 WNT9AO14904 365 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 MT-CO1P00395 513 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 WNT1P04628 370 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 RHOCP08134 193 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 POLR2FP61218 127 aaKnown RBP19.35■□□□□ 0.69
SF3A1-205ENST00000463818 KRT83P78385 493 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 PRAMEF14Q5SWL7 426 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 FAM46CQ5VWP2 391 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 TRNP1Q6NT89 227 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms