RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 GPT2Q8TD30 523 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 OMDQ99983 421 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 TM7SF3Q9NS93 570 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 NOCTQ9UK39 431 aaKnown RBP21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 PCOLCE2Q9UKZ9 415 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 ANKRD6Q9Y2G4 727 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 FNDC3AQ9Y2H6 1198 aaKnown RBP21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 CABIN1Q9Y6J0 2220 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 NYNRINQ9P2P1 1898 aaKnown RBP21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 IGLV3-10A0A075B6K4 115 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 ALOX15BO15296 676 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 ENDOD1O94919 500 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 FLT3P36888 993 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 SULT1E1P49888 294 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 JAM2P57087 298 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 ARTNQ5T4W7 220 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 TAF3Q5VWG9 929 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 NCEH1Q6PIU2 408 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 RAB44Q7Z6P3 723 aaPredicted RBP21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 SETD3Q86TU7 594 aaPredicted RBP21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 KDF1Q8NAX2 398 aaPredicted RBP21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 GANCQ8TET4 914 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 GATA6Q92908 595 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 CAMK1GQ96NX5 476 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 TBCBQ99426 244 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 SLC25A13Q9UJS0 675 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 HS3ST2Q9Y278 367 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 MSRB2Q9Y3D2 182 aa21.12■□□□□ 0.97
PDLIM4-205ENST00000463615 TMEM8BA6NDV4 472 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 VILLO15195 856 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 FLRT2O43155 660 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 SLC7A4O43246 635 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 RNASEH2AO75792 299 aaKnown RBP21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 CYP1A1P04798 512 aaPredicted RBP21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 MMEP08473 750 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 DRD3P35462 400 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 CTSKP43235 329 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 RNASE9P60153 205 aaKnown RBP21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 CDR2Q01850 454 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 DEUP1Q05D60 604 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 DSG4Q86SJ6 1040 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 SH2D3CQ8N5H7 860 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 GBP4Q96PP9 640 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 HAPLN3Q96S86 360 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 SIK2Q9H0K1 926 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 VPS16Q9H269 839 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 KDM4CQ9H3R0 1056 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 VPS28Q9UK41 221 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 SIK3Q9Y2K2 1263 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 PCDHB9Q9Y5E1 797 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 SNX11Q9Y5W9 270 aa21.11■□□□□ 0.97
PDLIM4-205ENST00000463615 LRRC10BA6NIK2 292 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 MCF2LO15068 1137 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 LATO43561 262 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 HYAL3O43820 417 aaPredicted RBP21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 PCDHGA12O60330 932 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 DFNA5O60443 496 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 CNTN5O94779 1100 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 TPM2P07951 284 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 VAV1P15498 845 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 SPINK2P20155 84 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 GGCXP38435 758 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 PSMD8P48556 350 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 ADPRHP54922 357 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 SUZ12Q15022 739 aaKnown RBP21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 ALFQ53S48 1182 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 TRNP1Q6NT89 227 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 ADAMTS14Q8WXS8 1223 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 OR8D1Q8WZ84 308 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 EBF2Q9HAK2 575 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 PPM1HQ9ULR3 514 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 IGF2RP11717 2491 aa21.1■□□□□ 0.97
PDLIM4-205ENST00000463615 C1QTNF9BB2RNN3 333 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 DKK1O94907 266 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 IL1BP01584 269 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 C1QTNF9P0C862 333 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 CHRNB2P17787 502 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 MMP8P22894 467 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 SOX5P35711 763 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 KRT83P78385 493 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 FMO1Q01740 532 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 DLG2Q15700 870 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 FKBP15Q5T1M5 1219 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 FAM46CQ5VWP2 391 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 NAA35Q5VZE5 725 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 LRSAM1Q6UWE0 723 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 LRRC31Q6UY01 552 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 TRIM72Q6ZMU5 477 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 CPA5Q8WXQ8 436 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 PSMB7Q99436 277 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 C2orf49Q9BVC5 232 aaPredicted RBP21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 ANO10Q9NW15 660 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 FANCLQ9NW38 375 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 ZNF212Q9UDV6 495 aa21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 LIMA1Q9UHB6 759 aaKnown RBP21.09■□□□□ 0.97
PDLIM4-205ENST00000463615 EPHB6O15197 1021 aa21.08■□□□□ 0.97
PDLIM4-205ENST00000463615 KRT37O76014 449 aa21.08■□□□□ 0.97
PDLIM4-205ENST00000463615 FTH1P19P0C7X4 201 aa21.08■□□□□ 0.97
PDLIM4-205ENST00000463615 NUDT1P36639 197 aa21.08■□□□□ 0.97
PDLIM4-205ENST00000463615 GSCP56915 257 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms