RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 HOXD12P35452 270 aa13.41□□□□□ -0.26
R3HDM1-213ENST00000463230 PCK1P35558 622 aa13.41□□□□□ -0.26
R3HDM1-213ENST00000463230 GGCXP38435 758 aa13.41□□□□□ -0.26
R3HDM1-213ENST00000463230 OGDHQ02218 1023 aa13.41□□□□□ -0.26
R3HDM1-213ENST00000463230 SLC20A2Q08357 652 aa13.41□□□□□ -0.26
R3HDM1-213ENST00000463230 PIGHQ14442 188 aaPredicted RBP13.41□□□□□ -0.26
R3HDM1-213ENST00000463230 CSRP2Q16527 193 aa13.41□□□□□ -0.26
R3HDM1-213ENST00000463230 NIPA2Q8N8Q9 360 aa13.41□□□□□ -0.26
R3HDM1-213ENST00000463230 TMPRSS4Q9NRS4 437 aa13.41□□□□□ -0.26
R3HDM1-213ENST00000463230 MBD1Q9UIS9 605 aaPredicted RBP13.41□□□□□ -0.26
R3HDM1-213ENST00000463230 HS3ST2Q9Y278 367 aa13.41□□□□□ -0.26
R3HDM1-213ENST00000463230 CHD5Q8TDI0 1954 aa13.41□□□□□ -0.26
R3HDM1-213ENST00000463230 WASH4PA8MWX3 477 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 AKR1B15C9JRZ8 316 aaPredicted RBP13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 FGF10O15520 208 aaPredicted RBP13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 ATMINO43313 823 aaPredicted RBP13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 SRGAP2O75044 1071 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 LRIG2O94898 1065 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 ACADMP11310 421 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 EIF4A3P38919 411 aaKnown RBP13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 ASTE1Q2TB18 679 aaPredicted RBP13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 TTC31Q49AM3 519 aaPredicted RBP13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 RAB6CQ53S08 254 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 CCDC122Q5T0U0 273 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 SCYL2Q6P3W7 929 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 NLRP14Q86W24 1093 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 MRFAP1L1Q96HT8 127 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 PSMB7Q99436 277 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 MKRN2Q9H000 416 aaKnown RBP13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 RAB6CQ9H0N0 254 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 CATSPERBQ9H7T0 1116 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 NEU3Q9UQ49 428 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 TNRC6BQ9UPQ9 1833 aaKnown RBP13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 THADAQ6YHU6 1953 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 BCLAF3A2AJT9 711 aaKnown RBP13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 HLA-EP13747 358 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 BCKDHBP21953 392 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 CD6P30203 668 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 CTSOP43234 321 aaPredicted RBP13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 GEMIN4P57678 1058 aaKnown RBP13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 LMNB2Q03252 620 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 SEMA3BQ13214 749 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 USP30Q70CQ3 517 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 RABEPKQ7Z6M1 372 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 DSG4Q86SJ6 1040 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 FOXJ1Q92949 421 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 MAGEH1Q9H213 219 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 DEF6Q9H4E7 631 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 VPS45Q9NRW7 570 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 MPP6Q9NZW5 540 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 UVRAGQ9P2Y5 699 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 MYO1AQ9UBC5 1043 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 IP6K2Q9UHH9 426 aa13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 RIF1Q5UIP0 2472 aaKnown RBP13.4□□□□□ -0.26
R3HDM1-213ENST00000463230 PRR5-ARHGAP8B1AHC4 643 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 DCLK1O15075 740 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 PRPSAP2O60256 369 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 DNTTP04053 509 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 SDHBP21912 280 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 RPS14P62263 151 aaKnown RBP13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 ARHGAP8P85298 464 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 GNA12Q03113 381 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 ZNF252P-AS1Q0IIN9 211 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 ELAVL3Q14576 367 aaKnown RBP13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 LPAL2Q16609 132 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 PLA2G2CQ5R387 149 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 ERMARDQ5T6L9 678 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 C9orf64Q5T6V5 341 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 RETSATQ6NUM9 610 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 TFAP2DQ7Z6R9 452 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 CADM4Q8NFZ8 388 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 OR52K2Q8NGK3 314 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 RLN3Q8WXF3 142 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 CCDC114Q96M63 670 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 THAP2Q9H0W7 228 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 RBSNQ9H1K0 784 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 SIN3BO75182 1162 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 NDUFS2O75306 463 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 ADH1BP00325 375 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 ZNF806P0C7X5 589 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 TPMTP51580 245 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 PEAR1Q5VY43 1037 aaPredicted RBP13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 RWDD4Q6NW29 188 aaKnown RBP13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 CYP2U1Q7Z449 544 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 SH2D3CQ8N5H7 860 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 RTL3Q8N8U3 475 aaKnown RBP13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 FRS2Q8WU20 508 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 ACE2Q9BYF1 805 aaPredicted RBP13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 CEP44Q9C0F1 390 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 PABPC3Q9H361 631 aaKnown RBP13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 WSB2Q9NYS7 404 aaPredicted RBP13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 VPS51Q9UID3 782 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 TPX2Q9ULW0 747 aaKnown RBP13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 CYP8B1Q9UNU6 501 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 AP4E1Q9UPM8 1137 aa13.39□□□□□ -0.27
R3HDM1-213ENST00000463230 GPR179Q6PRD1 2367 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 ZSCAN5CA6NGD5 496 aaPredicted RBP13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 TTC34A8MYJ7 566 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 AKR1B10O60218 316 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 H2AFZP0C0S5 128 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms