RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 CCAR2Q8N163 923 aaKnown RBP20.39■□□□□ 0.85
VARS-221ENST00000463184 ZNF606Q8WXB4 792 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 TSC1Q92574 1164 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 DCBLD2Q96PD2 775 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 PRMT1Q99873 361 aaKnown RBP20.39■□□□□ 0.85
VARS-221ENST00000463184 NUP62CLQ9H1M0 184 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 KIAA1468Q9P260 1216 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 ARHGAP20Q9P2F6 1191 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 MAN1B1Q9UKM7 699 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 SMG1Q96Q15 3661 aaKnown RBP20.39■□□□□ 0.85
VARS-221ENST00000463184 IGSF10Q6WRI0 2623 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 ASXL3Q9C0F0 2248 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 BICDL2A1A5D9 508 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 E5RJQ4 531 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 GNA14O95837 355 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 PPP2CBP62714 309 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 PPP2CAP67775 309 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 OVGP1Q12889 678 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 ILKQ13418 452 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 RABGAP1LQ5R372 815 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 FAM46CQ5VWP2 391 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 IQCHQ86VS3 1027 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 FRS2Q8WU20 508 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 NRSN2Q9GZP1 204 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 DMTF1Q9Y222 760 aa20.38■□□□□ 0.85
VARS-221ENST00000463184 A0A1B0GVM2 712 aa20.37■□□□□ 0.85
VARS-221ENST00000463184 TCAF2A6NFQ2 919 aa20.37■□□□□ 0.85
VARS-221ENST00000463184 PLRG1O43660 514 aaKnown RBP20.37■□□□□ 0.85
VARS-221ENST00000463184 LETM1O95202 739 aaPredicted RBP20.37■□□□□ 0.85
VARS-221ENST00000463184 VAV1P15498 845 aa20.37■□□□□ 0.85
VARS-221ENST00000463184 PTMSP20962 102 aa20.37■□□□□ 0.85
VARS-221ENST00000463184 TARDBPQ13148 414 aaKnown RBP eCLIP20.37■□□□□ 0.85
VARS-221ENST00000463184 HES3Q5TGS1 186 aa20.37■□□□□ 0.85
VARS-221ENST00000463184 SFMBT2Q5VUG0 894 aa20.37■□□□□ 0.85
VARS-221ENST00000463184 KLHL10Q6JEL2 608 aa20.37■□□□□ 0.85
VARS-221ENST00000463184 FBXL19Q6PCT2 694 aa20.37■□□□□ 0.85
VARS-221ENST00000463184 TRIM59Q8IWR1 403 aa20.37■□□□□ 0.85
VARS-221ENST00000463184 NELFBQ8WX92 580 aa20.37■□□□□ 0.85
VARS-221ENST00000463184 OR8D1Q8WZ84 308 aa20.37■□□□□ 0.85
VARS-221ENST00000463184 UBE2TQ9NPD8 197 aaPredicted RBP20.37■□□□□ 0.85
VARS-221ENST00000463184 CYTH4Q9UIA0 394 aa20.37■□□□□ 0.85
VARS-221ENST00000463184 AK5Q9Y6K8 562 aa20.37■□□□□ 0.85
VARS-221ENST00000463184 PPP1R3GB7ZBB8 358 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 ATP9BO43861 1147 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 RTN2O75298 545 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 AFPP02771 609 aaKnown RBP20.36■□□□□ 0.85
VARS-221ENST00000463184 GLI1P08151 1106 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 CKMT2P17540 419 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 CCR1P32246 355 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 MARSP56192 900 aaKnown RBP20.36■□□□□ 0.85
VARS-221ENST00000463184 CLDN6P56747 220 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 CDK17Q00537 523 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 MTA1Q13330 715 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 MORC3Q14149 939 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 STAT4Q14765 748 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 RTP5Q14D33 572 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 ACCSLQ4AC99 568 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 CXorf57Q6NSI4 855 aaKnown RBP20.36■□□□□ 0.85
VARS-221ENST00000463184 LRRC69Q6ZNQ3 347 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 TRIM69Q86WT6 500 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 SPATS2Q86XZ4 545 aaKnown RBP20.36■□□□□ 0.85
VARS-221ENST00000463184 CACTIN-AS1Q8N1I8 211 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 CRELD1Q96HD1 420 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 INTS2Q9H0H0 1204 aaKnown RBP20.36■□□□□ 0.85
VARS-221ENST00000463184 FAM204AQ9H8W3 233 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 SLC25A13Q9UJS0 675 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 SARDHQ9UL12 918 aa20.36■□□□□ 0.85
VARS-221ENST00000463184 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.36■□□□□ 0.85
VARS-221ENST00000463184 C1QTNF3-AMACRE9PGA6 284 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 ALOX15BO15296 676 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 THAP12O43422 761 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 GNA15P30679 374 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 MAT2AP31153 395 aaKnown RBP20.35■□□□□ 0.85
VARS-221ENST00000463184 EIF2S3P41091 472 aaKnown RBP20.35■□□□□ 0.85
VARS-221ENST00000463184 NUMBP49757 651 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 METAP1P53582 386 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 PITX1P78337 314 aaPredicted RBP20.35■□□□□ 0.85
VARS-221ENST00000463184 SEMG2Q02383 582 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 PDCLQ13371 301 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 FBXL22Q6P050 247 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 ENOSF1Q7L5Y1 443 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 KANSL1Q7Z3B3 1105 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 CIR1Q86X95 450 aaPredicted RBP20.35■□□□□ 0.85
VARS-221ENST00000463184 PIP4K2CQ8TBX8 421 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 RNF34Q969K3 372 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 ALG14Q96F25 216 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 UBL7Q96S82 380 aaPredicted RBP20.35■□□□□ 0.85
VARS-221ENST00000463184 ASNSD1Q9NWL6 643 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 PPM1HQ9ULR3 514 aa20.35■□□□□ 0.85
VARS-221ENST00000463184 BIN1O00499 593 aa20.34■□□□□ 0.85
VARS-221ENST00000463184 MCF2LO15068 1137 aa20.34■□□□□ 0.85
VARS-221ENST00000463184 RRP8O43159 456 aaKnown RBP20.34■□□□□ 0.85
VARS-221ENST00000463184 TAF5Q15542 800 aa20.34■□□□□ 0.85
VARS-221ENST00000463184 SETMARQ53H47 684 aaPredicted RBP20.34■□□□□ 0.85
VARS-221ENST00000463184 EFHC1Q5JVL4 640 aa20.34■□□□□ 0.85
VARS-221ENST00000463184 AGBL4Q5VU57 503 aa20.34■□□□□ 0.85
VARS-221ENST00000463184 DEFB106AQ8N104 65 aa20.34■□□□□ 0.85
VARS-221ENST00000463184 FAM81BQ96LP2 452 aa20.34■□□□□ 0.85
VARS-221ENST00000463184 RPRD1AQ96P16 312 aaPredicted RBP20.34■□□□□ 0.85
VARS-221ENST00000463184 SLC2A13Q96QE2 648 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms