RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 SHOC2Q9UQ13 582 aa18.54■□□□□ 0.56
ATPAF2-202ENST00000462733 COL6A3P12111 3177 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 LEFTY2O00292 366 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 RASSF9O75901 435 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 ITGAVP06756 1048 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 VIMP08670 466 aaKnown RBP18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 SLC2A3P11169 496 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 CORO1AP31146 461 aaKnown RBP18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 HARS2P49590 506 aaKnown RBP18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 VCPP55072 806 aaKnown RBP18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 RING1Q06587 406 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 PPP2R5DQ14738 602 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 LLGL1Q15334 1064 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 P3H1Q32P28 736 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 ARL13BQ3SXY8 428 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 FAM78AQ5JUQ0 283 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 BRMS1LQ5PSV4 323 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 PPP1R21Q6ZMI0 780 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 CYP4V2Q6ZWL3 525 aaPredicted RBP18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 TDRPQ86YL5 185 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 DYDC1Q8WWB3 177 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 HSPH1Q92598 858 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 SNRNP25Q9BV90 132 aaKnown RBP18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 MAGEB5Q9BZ81 275 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 PRDM6Q9NQX0 595 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 KLHL11Q9NVR0 708 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 ARHGEF38Q9NXL2 777 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 EURLQ9NYK6 297 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 XPO7Q9UIA9 1087 aaKnown RBP18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 SH3BP1Q9Y3L3 701 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 UNC80Q8N2C7 3258 aa18.53■□□□□ 0.56
ATPAF2-202ENST00000462733 hCG_1818297A0A087WSY0 165 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 KCNU1A8MYU2 1149 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 I6L893 689 aaPredicted RBP18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 ADRA1BP35368 520 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 MAGEA4P43358 317 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 SCTRP47872 440 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 RASA2Q15283 850 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 NUGGCQ68CJ6 796 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 MFSD7Q6UXD7 560 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 ANKS1BQ7Z6G8 1248 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 DENND1CQ8IV53 801 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 UNC45BQ8IWX7 931 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 ASB16Q96NS5 453 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 RBM15Q96T37 977 aaKnown RBP eCLIP18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 PCDH9Q9HC56 1237 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 FZD10Q9ULW2 581 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 SNX10Q9Y5X0 201 aa18.52■□□□□ 0.56
ATPAF2-202ENST00000462733 KLKB1P03952 638 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 KRT7P08729 469 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 VIPR2P41587 438 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 XRCC4Q13426 336 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 CCDC38Q502W7 563 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 BOLA3Q53S33 107 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 ARHGEF18Q6ZSZ5 1173 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 ATP6V0D2Q8N8Y2 350 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 TTC13Q8NBP0 860 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 RIN3Q8TB24 985 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 CKAP2Q8WWK9 683 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 SMARCD2Q92925 531 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 NTAN1Q96AB6 310 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 SIK2Q9H0K1 926 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 TPX2Q9ULW0 747 aaKnown RBP18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 AP4E1Q9UPM8 1137 aa18.52■□□□□ 0.55
ATPAF2-202ENST00000462733 SNX3O60493 162 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 PAGE1O75459 146 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 LAMP2P13473 410 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 CDKN2BP42772 138 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 VPS41P49754 854 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 SLC18A1P54219 525 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 TFF2Q03403 129 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 OASLQ15646 514 aaKnown RBP18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 CA9Q16790 459 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 EFHC2Q5JST6 749 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 PCGF5Q86SE9 256 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 PYROXD2Q8N2H3 581 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 CELF5Q8N6W0 485 aaKnown RBP18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 GBP7Q8N8V2 638 aaPredicted RBP18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 SGSM3Q96HU1 749 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 DHX35Q9H5Z1 703 aaKnown RBP18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 SLC40A1Q9NP59 571 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 NKIRAS1Q9NYS0 192 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 SENP1Q9P0U3 644 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 LSM7Q9UK45 103 aaKnown RBP18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 ZNF148Q9UQR1 794 aa18.51■□□□□ 0.55
ATPAF2-202ENST00000462733 SMAPO00193 183 aa18.5■□□□□ 0.55
ATPAF2-202ENST00000462733 BRAFP15056 766 aa18.5■□□□□ 0.55
ATPAF2-202ENST00000462733 IFNAR2P48551 515 aa18.5■□□□□ 0.55
ATPAF2-202ENST00000462733 LEXMQ3ZCV2 418 aa18.5■□□□□ 0.55
ATPAF2-202ENST00000462733 SWT1Q5T5J6 900 aaKnown RBP18.5■□□□□ 0.55
ATPAF2-202ENST00000462733 OTOP3Q7RTS5 596 aa18.5■□□□□ 0.55
ATPAF2-202ENST00000462733 BTN2A3PQ96KV6 586 aa18.5■□□□□ 0.55
ATPAF2-202ENST00000462733 AGO1Q9UL18 857 aaKnown RBP18.5■□□□□ 0.55
ATPAF2-202ENST00000462733 DNPEPQ9ULA0 475 aa18.5■□□□□ 0.55
ATPAF2-202ENST00000462733 SLC12A4Q9UP95 1085 aa18.5■□□□□ 0.55
ATPAF2-202ENST00000462733 SUN1O94901 812 aa18.49■□□□□ 0.55
ATPAF2-202ENST00000462733 WEE1P30291 646 aa18.49■□□□□ 0.55
ATPAF2-202ENST00000462733 SLC11A2P49281 568 aa18.49■□□□□ 0.55
ATPAF2-202ENST00000462733 AIF1P55008 147 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms