RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 KRT9P35527 623 aa18.39■□□□□ 0.53
SSB-206ENST00000461708 MTIF2P46199 727 aaKnown RBP18.39■□□□□ 0.53
SSB-206ENST00000461708 SLC6A3Q01959 620 aa18.39■□□□□ 0.53
SSB-206ENST00000461708 APBA1Q02410 837 aa18.39■□□□□ 0.53
SSB-206ENST00000461708 ZNF177Q13360 481 aaPredicted RBP18.39■□□□□ 0.53
SSB-206ENST00000461708 MAN2A1Q16706 1144 aa18.39■□□□□ 0.53
SSB-206ENST00000461708 ACBD5Q5T8D3 534 aaPredicted RBP18.39■□□□□ 0.53
SSB-206ENST00000461708 FAM46CQ5VWP2 391 aa18.39■□□□□ 0.53
SSB-206ENST00000461708 FAM183BPQ6ZVS7 135 aa18.39■□□□□ 0.53
SSB-206ENST00000461708 CREBRFQ8IUR6 639 aa18.39■□□□□ 0.53
SSB-206ENST00000461708 FAM71AQ8IYT1 594 aa18.39■□□□□ 0.53
SSB-206ENST00000461708 OR14C36Q8NHC7 312 aa18.39■□□□□ 0.53
SSB-206ENST00000461708 OR8D1Q8WZ84 308 aa18.39■□□□□ 0.53
SSB-206ENST00000461708 RPRD1AQ96P16 312 aaPredicted RBP18.39■□□□□ 0.53
SSB-206ENST00000461708 OR51B4Q9Y5P0 310 aa18.39■□□□□ 0.53
SSB-206ENST00000461708 ARID1BQ8NFD5 2236 aaPredicted RBP18.39■□□□□ 0.53
SSB-206ENST00000461708 URB1O60287 2271 aaKnown RBP18.39■□□□□ 0.53
SSB-206ENST00000461708 ERBB2P04626 1255 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 WNT1P04628 370 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 DRD3P35462 400 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 CLCN1P35523 988 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 SCNN1AP37088 669 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 CAMK4Q16566 473 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 PTPN20Q4JDL3 420 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 SLC45A4Q5BKX6 768 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 BRMS1LQ5PSV4 323 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 OR6B2Q6IFH4 312 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 CIR1Q86X95 450 aaPredicted RBP18.38■□□□□ 0.53
SSB-206ENST00000461708 PASD1Q8IV76 773 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 FAM114A1Q8IWE2 563 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 NT5C3BQ969T7 300 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 ERVMER34-1Q9H9K5 563 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 GDF3Q9NR23 364 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 SLC25A13Q9UJS0 675 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 DNAJC12Q9UKB3 198 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 PPM1HQ9ULR3 514 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 DMTF1Q9Y222 760 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 PAXBP1Q9Y5B6 917 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 HS3ST4Q9Y661 456 aa18.38■□□□□ 0.53
SSB-206ENST00000461708 SYNJ2BP-COX16A0A087WUM0 186 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 FOXN3O00409 490 aaPredicted RBP18.37■□□□□ 0.53
SSB-206ENST00000461708 MCF2LO15068 1137 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 PAGE1O75459 146 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 GRAP2O75791 330 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 CDK4P11802 303 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 CDH5P33151 784 aaPredicted RBP18.37■□□□□ 0.53
SSB-206ENST00000461708 RXRGP48443 463 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 CXCR3P49682 368 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 CDH4P55283 916 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 CENPCQ03188 943 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 OVGP1Q12889 678 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 NME3Q13232 169 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 SMAD1Q15797 465 aaKnown RBP18.37■□□□□ 0.53
SSB-206ENST00000461708 SLC47A2Q86VL8 602 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 IQCHQ86VS3 1027 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 OXR1Q8N573 874 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 PGAP3Q96FM1 320 aaPredicted RBP18.37■□□□□ 0.53
SSB-206ENST00000461708 SERAC1Q96JX3 654 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 NPY6RQ99463 290 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 SYNCQ9H7C4 482 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 AASDHPPTQ9NRN7 309 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 COX16Q9P0S2 106 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 FTSJ1Q9UET6 329 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 VPS28Q9UK41 221 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 RALYQ9UKM9 306 aaKnown RBP18.37■□□□□ 0.53
SSB-206ENST00000461708 VANGL2Q9ULK5 521 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 HS3ST2Q9Y278 367 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 PCDHGA1Q9Y5H4 931 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 BAHCC1Q9P281 2608 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 LAMA5O15230 3695 aa18.37■□□□□ 0.53
SSB-206ENST00000461708 TBC1D3DA0A087WVF3 549 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 TBC1D3IA0A087WXS9 549 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 TBC1D3EA0A087X179 549 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 TBC1D3KA0A087X1G2 549 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 TBC1D3FA6NER0 549 aaPredicted RBP18.36■□□□□ 0.53
SSB-206ENST00000461708 TBC1D3LB9A6J9 549 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 E9PAM4 449 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 M0QYT0 321 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 TLR4O00206 839 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 PLRG1O43660 514 aaKnown RBP18.36■□□□□ 0.53
SSB-206ENST00000461708 F9P00740 461 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 TBC1D3HP0C7X1 549 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 VAV1P15498 845 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 ERCC5P28715 1186 aaPredicted RBP18.36■□□□□ 0.53
SSB-206ENST00000461708 ARRB1P49407 418 aaPredicted RBP18.36■□□□□ 0.53
SSB-206ENST00000461708 NXPH1P58417 271 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 DLG2Q15700 870 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 TBC1D3GQ6DHY5 549 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 TBC1D3CQ6IPX1 549 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 NAPEPLDQ6IQ20 393 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 DPY19L2P1Q6NXN4 242 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.36■□□□□ 0.53
SSB-206ENST00000461708 PRPF39Q86UA1 669 aaKnown RBP18.36■□□□□ 0.53
SSB-206ENST00000461708 TRIM69Q86WT6 500 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 TBC1D3Q8IZP1 549 aaPredicted RBP18.36■□□□□ 0.53
SSB-206ENST00000461708 SH2D3CQ8N5H7 860 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 MFSD2AQ8NA29 543 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 TMEM35BQ8NCS4 154 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 SAP25Q8TEE9 199 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 C1orf74Q96LT6 269 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms