RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 NEFLP07196 543 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 THEGLP0DJG4 465 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 CNTN1Q12860 1018 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 ARL13BQ3SXY8 428 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 LINC00303Q3SY05 128 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 SGO2Q562F6 1265 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 C3orf38Q5JPI3 329 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 PRICKLE2Q7Z3G6 844 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 FAM186BQ8IYM0 893 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 SLC22A18ASQ8N1D0 253 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 SIX6OS1Q8N1H7 587 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 UBR7Q8N806 425 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 CCDC150Q8NCX0 1101 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 FBXL13Q8NEE6 735 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 OR13H1Q8NG92 308 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 IRGQQ8WZA9 623 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 TFAP2BQ92481 460 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 NOX5Q96PH1 765 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 SPAG5Q96R06 1193 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 ZSWIM1Q9BR11 485 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 TRIM4Q9C037 500 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 NLGN3Q9NZ94 848 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 PPM1HQ9ULR3 514 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 ENTPD2Q9Y5L3 495 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 KIF26BQ2KJY2 2108 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 TEX15Q9BXT5 2789 aa12.23□□□□□ -0.45
HCFC1-204ENST00000461098 SPENQ96T58 3664 aaKnown RBP12.23□□□□□ -0.45
HCFC1-204ENST00000461098 K7ESM1 405 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 RNF103O00237 685 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 SCAMP1O15126 338 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 RNGTTO60942 597 aaKnown RBP12.22□□□□□ -0.45
HCFC1-204ENST00000461098 NEBLO76041 1014 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 LTFP02788 710 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 SETSIPP0DME0 302 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 PRLRP16471 622 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 PSMC2P35998 433 aaKnown RBP12.22□□□□□ -0.45
HCFC1-204ENST00000461098 RGS7P49802 495 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 PLK1P53350 603 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 CLN3Q13286 438 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 ZNF284Q2VY69 593 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 ZCWPW2Q504Y3 356 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 SETMARQ53H47 684 aaPredicted RBP12.22□□□□□ -0.45
HCFC1-204ENST00000461098 COLEC12Q5KU26 742 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 ERICH6BQ5W0A0 696 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 IFI44Q8TCB0 444 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 DQX1Q8TE96 717 aaKnown RBP12.22□□□□□ -0.45
HCFC1-204ENST00000461098 ALG14Q96F25 216 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 ATXN7L3BQ96GX2 97 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 MYOCQ99972 504 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 HESX1Q9UBX0 185 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 TLR6Q9Y2C9 796 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 PCDHGA8Q9Y5G5 932 aa12.22□□□□□ -0.45
HCFC1-204ENST00000461098 TYW5A2RUC4 315 aaKnown RBP12.21□□□□□ -0.45
HCFC1-204ENST00000461098 SLC31A1O15431 190 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 MOCS3O95396 460 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 VDRP11473 427 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 KRT13P13646 458 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 ITGB6P18564 788 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
HCFC1-204ENST00000461098 NFATC3Q12968 1075 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 CUL2Q13617 745 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 CBWD6Q4V339 395 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 ZNF542PQ5EBM4 170 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 CBWD3Q5JTY5 395 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 CBWD5Q5RIA9 395 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 PIP5KL1Q5T9C9 394 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 RNF219Q5W0B1 726 aaPredicted RBP12.21□□□□□ -0.45
HCFC1-204ENST00000461098 CXorf57Q6NSI4 855 aaKnown RBP12.21□□□□□ -0.45
HCFC1-204ENST00000461098 LCLAT1Q6UWP7 414 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 CCDC81Q6ZN84 652 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 GCNT7Q6ZNI0 430 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 CLEC14AQ86T13 490 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 CEP57L1Q8IYX8 460 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 LGI2Q8N0V4 545 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 OR52K2Q8NGK3 314 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 MAPK15Q8TD08 544 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 KLK6Q92876 244 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 INTS4Q96HW7 963 aaKnown RBP12.21□□□□□ -0.45
HCFC1-204ENST00000461098 ZNF396Q96N95 335 aaPredicted RBP12.21□□□□□ -0.45
HCFC1-204ENST00000461098 DDX50Q9BQ39 737 aaKnown RBP12.21□□□□□ -0.45
HCFC1-204ENST00000461098 ABCG4Q9H172 646 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 USP29Q9HBJ7 922 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 PREBQ9HCU5 417 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 FZD3Q9NPG1 666 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 GPR27Q9NS67 375 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 FAM13BQ9NYF5 915 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 ZFR2Q9UPR6 939 aaKnown RBP12.21□□□□□ -0.45
HCFC1-204ENST00000461098 NAALADL1Q9UQQ1 740 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 CEP83Q9Y592 693 aa12.21□□□□□ -0.45
HCFC1-204ENST00000461098 TLN1Q9Y490 2541 aaKnown RBP12.2□□□□□ -0.46
HCFC1-204ENST00000461098 MCF2LO15068 1137 aa12.2□□□□□ -0.46
HCFC1-204ENST00000461098 ATP9BO43861 1147 aa12.2□□□□□ -0.46
HCFC1-204ENST00000461098 MOCS2O96007 188 aaPredicted RBP12.2□□□□□ -0.46
HCFC1-204ENST00000461098 CTSLP07711 333 aa12.2□□□□□ -0.46
HCFC1-204ENST00000461098 CD19P15391 556 aa12.2□□□□□ -0.46
HCFC1-204ENST00000461098 RBMS1P29558 406 aaKnown RBP12.2□□□□□ -0.46
HCFC1-204ENST00000461098 MXI1P50539 228 aa12.2□□□□□ -0.46
HCFC1-204ENST00000461098 PDX1P52945 283 aa12.2□□□□□ -0.46
HCFC1-204ENST00000461098 CLDN2P57739 230 aa12.2□□□□□ -0.46
HCFC1-204ENST00000461098 NFKB2Q00653 900 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms