RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 THAP11Q96EK4 314 aa15.8■□□□□ 0.12
SSR4-206ENST00000460616 MS4A4AQ96JQ5 239 aa15.8■□□□□ 0.12
SSR4-206ENST00000460616 ABT1Q9ULW3 272 aaKnown RBP15.8■□□□□ 0.12
SSR4-206ENST00000460616 LRRIQ4A6NIV6 560 aa15.8■□□□□ 0.12
SSR4-206ENST00000460616 CSPG5O95196 566 aa15.8■□□□□ 0.12
SSR4-206ENST00000460616 OCM2P0CE71 109 aa15.8■□□□□ 0.12
SSR4-206ENST00000460616 OCMP0CE72 109 aaPredicted RBP15.8■□□□□ 0.12
SSR4-206ENST00000460616 TCF7P36402 384 aaPredicted RBP15.8■□□□□ 0.12
SSR4-206ENST00000460616 ZNF157P51786 506 aaPredicted RBP15.8■□□□□ 0.12
SSR4-206ENST00000460616 ZNF143P52747 638 aaPredicted RBP15.8■□□□□ 0.12
SSR4-206ENST00000460616 CRADDP78560 199 aa15.8■□□□□ 0.12
SSR4-206ENST00000460616 STILQ15468 1287 aa15.8■□□□□ 0.12
SSR4-206ENST00000460616 ZNF829Q3KNS6 432 aaPredicted RBP15.8■□□□□ 0.12
SSR4-206ENST00000460616 LSM12Q3MHD2 195 aaKnown RBP15.8■□□□□ 0.12
SSR4-206ENST00000460616 ZBED5Q49AG3 693 aa15.8■□□□□ 0.12
SSR4-206ENST00000460616 RWDD4Q6NW29 188 aaKnown RBP15.8■□□□□ 0.12
SSR4-206ENST00000460616 CYP4V2Q6ZWL3 525 aaPredicted RBP15.8■□□□□ 0.12
SSR4-206ENST00000460616 PQLC3Q8N755 202 aa15.8■□□□□ 0.12
SSR4-206ENST00000460616 DEPTORQ8TB45 409 aa15.8■□□□□ 0.12
SSR4-206ENST00000460616 BORCS5Q969J3 196 aa15.8■□□□□ 0.12
SSR4-206ENST00000460616 TMEM143Q96AN5 459 aa15.8■□□□□ 0.12
SSR4-206ENST00000460616 ACO2Q99798 780 aaKnown RBP15.8■□□□□ 0.12
SSR4-206ENST00000460616 ADPGKQ9BRR6 497 aa15.8■□□□□ 0.12
SSR4-206ENST00000460616 ILKAPQ9H0C8 392 aaPredicted RBP15.8■□□□□ 0.12
SSR4-206ENST00000460616 PSMD12O00232 456 aaPredicted RBP15.79■□□□□ 0.12
SSR4-206ENST00000460616 PIGRP01833 764 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 ZNF12P17014 697 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 HOXD12P35452 270 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 HALP42357 657 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 FAM102AQ5T9C2 384 aaPredicted RBP15.79■□□□□ 0.12
SSR4-206ENST00000460616 STEAP4Q687X5 459 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 FASTKD5Q7L8L6 764 aaKnown RBP15.79■□□□□ 0.12
SSR4-206ENST00000460616 DDHD1Q8NEL9 900 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 ADAM32Q8TC27 787 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 LRTOMTQ8WZ04 291 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 HNRNPABQ99729 332 aaKnown RBP15.79■□□□□ 0.12
SSR4-206ENST00000460616 CORO1BQ9BR76 489 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 TRPV6Q9H1D0 765 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 HIPK3Q9H422 1215 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 SLC38A7Q9NVC3 462 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 TXNDC16Q9P2K2 825 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 TLL2Q9Y6L7 1015 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 A0A0G2JMZ2 1700 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 TMEM114B3SHH9 223 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 ZNF701M0R085 212 aaPredicted RBP15.79■□□□□ 0.12
SSR4-206ENST00000460616 CD151P48509 253 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 GRM1Q13255 1194 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 SMAD1Q15797 465 aaKnown RBP15.79■□□□□ 0.12
SSR4-206ENST00000460616 CDO1Q16878 200 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 MTERF2Q49AM1 385 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 DCDC5Q6ZRR9 648 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 WDR49Q8IV35 697 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 SREK1Q8WXA9 508 aaKnown RBP15.79■□□□□ 0.12
SSR4-206ENST00000460616 BRI3BPQ8WY22 251 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 MCRS1Q96EZ8 462 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 RMDN3Q96TC7 470 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 CNPY3Q9BT09 278 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 ITGB1BP2Q9UKP3 347 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.79■□□□□ 0.12
SSR4-206ENST00000460616 ADGRA2Q96PE1 1338 aa15.79■□□□□ 0.12
SSR4-206ENST00000460616 UNCXA6NJT0 531 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 SLC22A2O15244 555 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 GCATO75600 419 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 ALDH2P05091 517 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 C8BP07358 591 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 TNFSF9P41273 254 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 C21orf59P57076 290 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 RPS6P62753 249 aaKnown RBP15.78■□□□□ 0.12
SSR4-206ENST00000460616 PDK2Q15119 407 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 C15orf59Q2T9L4 293 aaPredicted RBP15.78■□□□□ 0.12
SSR4-206ENST00000460616 SCYL2Q6P3W7 929 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 CPSF7Q8N684 471 aaKnown RBP15.78■□□□□ 0.12
SSR4-206ENST00000460616 PCDH19Q8TAB3 1148 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 TMA16Q96EY4 203 aaKnown RBP15.78■□□□□ 0.12
SSR4-206ENST00000460616 SLC29A1Q99808 456 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 PDZD7Q9H5P4 517 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 PRDM16Q9HAZ2 1276 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 RAVER2Q9HCJ3 691 aaKnown RBP15.78■□□□□ 0.12
SSR4-206ENST00000460616 CCL15-CCL14A0A0B4J2E2 113 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 HTR3EA5X5Y0 456 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 TMEM88BA6NKF7 163 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 HDAC3O15379 428 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 MCF2P10911 925 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 PDGFRAP16234 1089 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 GPD1P21695 349 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 FGFR3P22607 806 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 ASPAP45381 313 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 SP4Q02446 784 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 CCL15Q16663 113 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 DUOXA2Q1HG44 320 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 ZNF699Q32M78 642 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 RGMBQ6NW40 437 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 CMC1Q7Z7K0 106 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 FIBCD1Q8N539 461 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 PLEKHA8Q96JA3 519 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 ZIC5Q96T25 663 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 RMI1Q9H9A7 625 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 C20orf96Q9NUD7 363 aaPredicted RBP15.78■□□□□ 0.12
SSR4-206ENST00000460616 GPATCH2LQ9NWQ4 482 aa15.78■□□□□ 0.12
SSR4-206ENST00000460616 ADA2Q9NZK5 511 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms