RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ZBTB9Q96C00 473 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 HVCN1Q96D96 273 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 RNFT2Q96EX2 444 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 MPP4Q96JB8 637 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 SEC62Q99442 399 aaKnown RBP3.74□□□□□ -1.81
RFC4-211ENST00000460408 CLSTN3Q9BQT9 956 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 FRMD8Q9BZ67 464 aaPredicted RBP3.74□□□□□ -1.81
RFC4-211ENST00000460408 CTDSP1Q9GZU7 261 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 TMEM248Q9NWD8 314 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 FLRT1Q9NZU1 646 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 HSF4Q9ULV5 492 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 DTX4Q9Y2E6 619 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 SLC22A23A1A5C7 686 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 KCNJ18B7U540 433 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 PEX12O00623 359 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 WDHD1O75717 1129 aaPredicted RBP3.73□□□□□ -1.81
RFC4-211ENST00000460408 CYP4B1P13584 511 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 HOXB9P17482 250 aaPredicted RBP3.73□□□□□ -1.81
RFC4-211ENST00000460408 TYK2P29597 1187 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 PTGER1P34995 402 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 PSMC2P35998 433 aaKnown RBP3.73□□□□□ -1.81
RFC4-211ENST00000460408 GJC1P36383 396 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 MPP1Q00013 466 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 CFHR1Q03591 330 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 TBL3Q12788 808 aaKnown RBP3.73□□□□□ -1.81
RFC4-211ENST00000460408 G3BP1Q13283 466 aaKnown RBP eCLIP3.73□□□□□ -1.81
RFC4-211ENST00000460408 RUNDC3AQ59EK9 446 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 SH2D4BQ5SQS7 431 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 SLC30A9Q6PML9 568 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 RNF144BQ7Z419 303 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 BRSK2Q8IWQ3 736 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 UEVLDQ8IX04 471 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 VPS52Q8N1B4 723 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 TSPYL6Q8N831 410 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 ARL14EPQ8N8R7 260 aaPredicted RBP3.73□□□□□ -1.81
RFC4-211ENST00000460408 OSR1Q8TAX0 266 aaPredicted RBP3.73□□□□□ -1.81
RFC4-211ENST00000460408 WIPF2Q8TF74 440 aaPredicted RBP3.73□□□□□ -1.81
RFC4-211ENST00000460408 IP6K1Q92551 441 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 PIGKQ92643 395 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 STAMQ92783 540 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 ZBTB10Q96DT7 871 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 ADAD1Q96M93 576 aaKnown RBP3.73□□□□□ -1.81
RFC4-211ENST00000460408 C5orf34Q96MH7 638 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 FUZQ9BT04 418 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 TRIM31Q9BZY9 425 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 TAOK3Q9H2K8 898 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 Q9N2J8 555 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.73□□□□□ -1.81
RFC4-211ENST00000460408 TBX20Q9UMR3 447 aa3.73□□□□□ -1.81
RFC4-211ENST00000460408 SH2D7A6NKC9 451 aaPredicted RBP3.72□□□□□ -1.81
RFC4-211ENST00000460408 INPPL1O15357 1258 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 RNF8O76064 485 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 WNT1P04628 370 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 ATP1A3P13637 1013 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 DDIT3P35638 169 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 MTNR1AP48039 350 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 CCT4P50991 539 aaKnown RBP3.72□□□□□ -1.81
RFC4-211ENST00000460408 ARHGAP8P85298 464 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 HSF1Q00613 529 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 GALNT2Q10471 571 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 SLC10A2Q12908 348 aaPredicted RBP3.72□□□□□ -1.81
RFC4-211ENST00000460408 MTA1Q13330 715 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 PGM5Q15124 567 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 BAK1Q16611 211 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 PRICKLE4Q2TBC4 344 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 VWA5B1Q5TIE3 1220 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 NAPEPLDQ6IQ20 393 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 GJB7Q6PEY0 223 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 CRELD2Q6UXH1 353 aaPredicted RBP3.72□□□□□ -1.81
RFC4-211ENST00000460408 LRRC8DQ7L1W4 858 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.72□□□□□ -1.81
RFC4-211ENST00000460408 C16orf71Q8IYS4 520 aaPredicted RBP3.72□□□□□ -1.81
RFC4-211ENST00000460408 GALNT16Q8N428 558 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 PCYOX1LQ8NBM8 494 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 ST8SIA4Q92187 359 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 ELP4Q96EB1 424 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 RRP36Q96EU6 259 aaKnown RBP3.72□□□□□ -1.81
RFC4-211ENST00000460408 FCRL4Q96PJ5 515 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 LMAN2LQ9H0V9 348 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 MOV10Q9HCE1 1003 aaKnown RBP3.72□□□□□ -1.81
RFC4-211ENST00000460408 PDGFCQ9NRA1 345 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 ARL15Q9NXU5 204 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 UPB1Q9UBR1 384 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 SLC25A13Q9UJS0 675 aa3.72□□□□□ -1.81
RFC4-211ENST00000460408 WDR17Q8IZU2 1322 aa3.71□□□□□ -1.81
RFC4-211ENST00000460408 C2CD4BA6NLJ0 364 aa3.71□□□□□ -1.82
RFC4-211ENST00000460408 TP73O15350 636 aa3.71□□□□□ -1.82
RFC4-211ENST00000460408 ANP32CO43423 234 aa3.71□□□□□ -1.82
RFC4-211ENST00000460408 EPB41L2O43491 1005 aaKnown RBP3.71□□□□□ -1.82
RFC4-211ENST00000460408 CCNT1O60563 726 aaKnown RBP3.71□□□□□ -1.82
RFC4-211ENST00000460408 CD4P01730 458 aa3.71□□□□□ -1.82
RFC4-211ENST00000460408 TUBB4AP04350 444 aa3.71□□□□□ -1.82
RFC4-211ENST00000460408 IGKV2-30P06310 120 aa3.71□□□□□ -1.82
RFC4-211ENST00000460408 IFIT1P09914 478 aaKnown RBP3.71□□□□□ -1.82
RFC4-211ENST00000460408 WEE2P0C1S8 567 aa3.71□□□□□ -1.82
RFC4-211ENST00000460408 TFEBP19484 476 aa3.71□□□□□ -1.82
RFC4-211ENST00000460408 HNF1BP35680 557 aa3.71□□□□□ -1.82
RFC4-211ENST00000460408 PGM1P36871 562 aa3.71□□□□□ -1.82
RFC4-211ENST00000460408 OAZ1P54368 228 aa3.71□□□□□ -1.82
RFC4-211ENST00000460408 DDX10Q13206 875 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms