RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 FAM72AQ5TYM5 149 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 NCBP2-AS2Q69YL0 99 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 FAM72DQ6L9T8 149 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 STRA8Q7Z7C7 330 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 FAM35AQ86V20 835 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 FAM72BQ86X60 149 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 MIB1Q86YT6 1006 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 SCUBE1Q8IWY4 988 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 CRYBG2Q8N1P7 616 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 THEM5Q8N1Q8 247 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 SREK1Q8WXA9 508 aaKnown RBP15.74■□□□□ 0.11
LMNB1-203ENST00000460265 KHSRPQ92945 711 aaKnown RBP eCLIP15.74■□□□□ 0.11
LMNB1-203ENST00000460265 SGF29Q96ES7 293 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 CNTN3Q9P232 1028 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 DERAQ9Y315 318 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 A0A0J9YVX5 310 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 LYPLA1O75608 230 aaPredicted RBP15.74■□□□□ 0.11
LMNB1-203ENST00000460265 CSPG5O95196 566 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 CA8P35219 290 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 PTPN9P43378 593 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 SLC12A2P55011 1212 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 MRPS6P82932 125 aaKnown RBP15.74■□□□□ 0.11
LMNB1-203ENST00000460265 POU6F1Q14863 301 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 DPYSL2Q16555 572 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 ARHGAP17Q68EM7 881 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 TAF2Q6P1X5 1199 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 ALYREFQ86V81 257 aaKnown RBP15.74■□□□□ 0.11
LMNB1-203ENST00000460265 SLC25A41Q8N5S1 370 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 SCAMP5Q8TAC9 235 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 E2F6O75461 281 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 OR6B1O95007 311 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 LHX1P48742 406 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 EPHB1P54762 984 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 MCCD1P59942 119 aaPredicted RBP15.73■□□□□ 0.11
LMNB1-203ENST00000460265 ABI1Q8IZP0 508 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 DCLK2Q8N568 766 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 SMG8Q8ND04 991 aaKnown RBP15.73■□□□□ 0.11
LMNB1-203ENST00000460265 DENND1AQ8TEH3 1009 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 CCDC124Q96CT7 223 aaKnown RBP15.73■□□□□ 0.11
LMNB1-203ENST00000460265 PABPC5Q96DU9 382 aaKnown RBP15.73■□□□□ 0.11
LMNB1-203ENST00000460265 FSD1LQ9BXM9 530 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 MIOSQ9NXC5 875 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 ARHGEF38Q9NXL2 777 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 NDE1Q9NXR1 346 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 TPP1O14773 563 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 MSI1O43347 362 aaKnown RBP15.73■□□□□ 0.11
LMNB1-203ENST00000460265 PGM1P36871 562 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 FDFT1P37268 417 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 HPCAP84074 193 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 FASTKD1Q53R41 847 aaKnown RBP15.73■□□□□ 0.11
LMNB1-203ENST00000460265 CERCAMQ5T4B2 595 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 OVOS1Q6IE37 1185 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 TFAP2DQ7Z6R9 452 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 ZNF467Q7Z7K2 595 aaPredicted RBP15.73■□□□□ 0.11
LMNB1-203ENST00000460265 SATL1Q86VE3 508 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 ZNF567Q8N184 647 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 FRMD8Q9BZ67 464 aaPredicted RBP15.73■□□□□ 0.11
LMNB1-203ENST00000460265 CAB39LQ9H9S4 337 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 IARS2Q9NSE4 1012 aaKnown RBP15.73■□□□□ 0.11
LMNB1-203ENST00000460265 WDR81Q562E7 1941 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 ARL5CA6NH57 179 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 NEMP1O14524 444 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 HSPA4LO95757 839 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 ELNP15502 786 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 PGGT1BP53609 377 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 MED21Q13503 144 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 DNAJC14Q6Y2X3 702 aaPredicted RBP15.73■□□□□ 0.11
LMNB1-203ENST00000460265 STRADAQ7RTN6 431 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 ARHGAP24Q8N264 748 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 CCNYL1Q8N7R7 359 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 MYLPFQ96A32 169 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 ZNF358Q9NW07 568 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 VANGL2Q9ULK5 521 aa15.73■□□□□ 0.11
LMNB1-203ENST00000460265 PGM3O95394 542 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 RASA2Q15283 850 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 TMEM259Q4ZIN3 620 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 TIGD5Q53EQ6 642 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 SLC9A4Q6AI14 798 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 GRAMD4Q6IC98 578 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 LINC01465Q8N7H1 131 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 HNRNPABQ99729 332 aaKnown RBP15.72■□□□□ 0.11
LMNB1-203ENST00000460265 MTG1Q9BT17 334 aaPredicted RBP15.72■□□□□ 0.11
LMNB1-203ENST00000460265 PADI3Q9ULW8 664 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 FCHO1O14526 889 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 PTGESO14684 152 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 MAGEB3O15480 346 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 HNRNPCL1O60812 293 aaKnown RBP15.72■□□□□ 0.11
LMNB1-203ENST00000460265 FLT3LGP49771 235 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 RLFQ13129 1914 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 ITGA9Q13797 1035 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 GPRIN1Q7Z2K8 1008 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 POU5F2Q8N7G0 328 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 PPP2R3CQ969Q6 453 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 EMID1Q96A84 441 aaPredicted RBP15.72■□□□□ 0.11
LMNB1-203ENST00000460265 MFSD3Q96ES6 412 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 ECSITQ9BQ95 431 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 THTPAQ9BU02 230 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 CRTAC1Q9NQ79 661 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 DNAJC16Q9Y2G8 782 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 WDR37Q9Y2I8 494 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms