RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 CNTN5O94779 1100 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 BCKDHBP21953 392 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 PSMA2P25787 234 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 OXTRP30559 389 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 DPP6P42658 865 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 DHPSP49366 369 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-213ENST00000460211 AIF1P55008 147 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 NRG1Q02297 640 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-213ENST00000460211 RPL6Q02878 288 aaKnown RBP15.35■□□□□ 0.05
ATG4B-213ENST00000460211 CREB5Q02930 508 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 ZBTB16Q05516 673 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 SFSWAPQ12872 951 aaKnown RBP15.35■□□□□ 0.05
ATG4B-213ENST00000460211 ARID5BQ14865 1188 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 EFHC2Q5JST6 749 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 PPP1R15BQ5SWA1 713 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 TMC6Q7Z403 805 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 ZNF683Q8IZ20 524 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 ZNF366Q8N895 744 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 OR8K1Q8NGG5 319 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 ZNF653Q96CK0 615 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 NCAPGQ9BPX3 1015 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 FEM1AQ9BSK4 669 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 EDEM2Q9BV94 578 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 C2orf49Q9BVC5 232 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-213ENST00000460211 ISCUQ9H1K1 167 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 SLC6A17Q9H1V8 727 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 PRSS16Q9NQE7 514 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 ITM2CQ9NQX7 267 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 TMPRSS4Q9NRS4 437 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 VPS45Q9NRW7 570 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 MPP6Q9NZW5 540 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 CYP8B1Q9UNU6 501 aa15.35■□□□□ 0.05
ATG4B-213ENST00000460211 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 IGHV1OR15-9A0A0B4J2B8 117 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 EDDM13A0A1B0GTR0 161 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 C1QTNF9BB2RNN3 333 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 GIPC1O14908 333 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 RNF8O76064 485 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 DNTTP04053 509 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 PLEKP08567 350 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-213ENST00000460211 C1QTNF9P0C862 333 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 CD6P30203 668 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 NOVA1P51513 510 aaKnown RBP15.34■□□□□ 0.05
ATG4B-213ENST00000460211 IRAK1P51617 712 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 COPAP53621 1224 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 HNRNPA1L2Q32P51 320 aaKnown RBP15.34■□□□□ 0.05
ATG4B-213ENST00000460211 ALFQ53S48 1182 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 HGSNATQ68CP4 663 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 RWDD4Q6NW29 188 aaKnown RBP15.34■□□□□ 0.05
ATG4B-213ENST00000460211 ZNF783Q6ZMS7 281 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 CYP2U1Q7Z449 544 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 TFAP2DQ7Z6R9 452 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 TMEFF1Q8IYR6 380 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 RPL10LQ96L21 214 aaKnown RBP15.34■□□□□ 0.05
ATG4B-213ENST00000460211 MRGPRX3Q96LB0 322 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 MYO1AQ9UBC5 1043 aa15.34■□□□□ 0.05
ATG4B-213ENST00000460211 MBD1Q9UIS9 605 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-213ENST00000460211 ILVBLA1L0T0 632 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 BCLAF3A2AJT9 711 aaKnown RBP15.33■□□□□ 0.04
ATG4B-213ENST00000460211 TMEM191CA6NGB0 347 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 C4orf47A7E2U8 309 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 ATMINO43313 823 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-213ENST00000460211 SPINK2P20155 84 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 HNRNPH3P31942 346 aaKnown RBP15.33■□□□□ 0.04
ATG4B-213ENST00000460211 ETFBP38117 255 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 CTSOP43234 321 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-213ENST00000460211 VASPP50552 380 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-213ENST00000460211 SCAPQ12770 1279 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 TTC31Q49AM3 519 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-213ENST00000460211 ACCSLQ4AC99 568 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 RAB6CQ53S08 254 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 LYSMD4Q5XG99 296 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 ZNF776Q68DI1 518 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-213ENST00000460211 VSTM4Q8IW00 320 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 CCDC185Q8N715 623 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 FRMD1Q8N878 549 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 FNIP1Q8TF40 1166 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 FOXJ1Q92949 421 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 TBC1D31Q96DN5 1066 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 ALG14Q96F25 216 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 MYO19Q96H55 970 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 TRIM5Q9C035 493 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 RAB6CQ9H0N0 254 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 DEF6Q9H4E7 631 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 USP36Q9P275 1121 aaKnown RBP15.33■□□□□ 0.04
ATG4B-213ENST00000460211 SLCO3A1Q9UIG8 710 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 SCML1Q9UN30 329 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 NCKAP1Q9Y2A7 1128 aa15.33■□□□□ 0.04
ATG4B-213ENST00000460211 TTC34A8MYJ7 566 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 SIN3BO75182 1162 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 LRIG2O94898 1065 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 PROS1P07225 676 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 RHOQP17081 205 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 L1CAMP32004 1257 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 MAPKAPK2P49137 400 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 TPMTP51580 245 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 FOXC1Q12948 553 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 ACAP1Q15027 740 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 CCDC122Q5T0U0 273 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 SYCP2LQ5T4T6 812 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms