RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 GGCXP38435 758 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 CTSKP43235 329 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 GABRB2P47870 512 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 SULT1E1P49888 294 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 IRAK1P51617 712 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 CCR5P51681 352 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 KCNMA1Q12791 1236 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 ZNF177Q13360 481 aaPredicted RBP23.43■■□□□ 1.34
PTPN4-207ENST00000460162 KLHDC7AQ5VTJ3 777 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 FRS2Q8WU20 508 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 NT5C3BQ969T7 300 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 FAM131CQ96AQ9 280 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 SLC6A18Q96N87 628 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 CDC6Q99741 560 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 NAA15Q9BXJ9 866 aaKnown RBP23.43■■□□□ 1.34
PTPN4-207ENST00000460162 PES1O00541 588 aaKnown RBP23.42■■□□□ 1.34
PTPN4-207ENST00000460162 ATP9BO43861 1147 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 DFNA5O60443 496 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 LSM8O95777 96 aaKnown RBP23.42■■□□□ 1.34
PTPN4-207ENST00000460162 UCHL3P15374 230 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 VAV1P15498 845 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 CXCR3P49682 368 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 NUMBP49757 651 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 CDH4P55283 916 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 C21orf59P57076 290 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 MSANTD4Q8NCY6 345 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 OR52K2Q8NGK3 314 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 SKA1Q96BD8 255 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 C18orf8Q96DM3 657 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 FEM1AQ9BSK4 669 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 VPS28Q9UK41 221 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 TBC1D30Q9Y2I9 924 aa23.42■■□□□ 1.34
PTPN4-207ENST00000460162 COL5A1P20908 1838 aaPredicted RBP23.41■■□□□ 1.34
PTPN4-207ENST00000460162 H0Y8X5 98 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 ALOX15BO15296 676 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 SLC7A4O43246 635 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 F9P00740 461 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 DRD3P35462 400 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 GRK6P43250 576 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 INAVAQ3KP66 663 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 TCP11X2Q5H9J9 407 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 ACBD5Q5T8D3 534 aaPredicted RBP23.41■■□□□ 1.34
PTPN4-207ENST00000460162 FAM102AQ5T9C2 384 aaPredicted RBP23.41■■□□□ 1.34
PTPN4-207ENST00000460162 RHBDD1Q8TEB9 315 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 OR8D1Q8WZ84 308 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 TKTL2Q9H0I9 626 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 WDCPQ9H6R7 721 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 SAMSN1Q9NSI8 373 aaKnown RBP23.41■■□□□ 1.34
PTPN4-207ENST00000460162 OR51B4Q9Y5P0 310 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 PTPRBP23467 1997 aa23.41■■□□□ 1.34
PTPN4-207ENST00000460162 F8VZ95 297 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 ADCY5O95622 1261 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 SLC25A52Q3SY17 297 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 FAM46CQ5VWP2 391 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 C14orf80Q86SX3 495 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 ERICH1Q86X53 443 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 XYLT1Q86Y38 959 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 PNPLA1Q8N8W4 532 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 OR14C36Q8NHC7 312 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 EPS8L1Q8TE68 723 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 SIK2Q9H0K1 926 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 KDM4CQ9H3R0 1056 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 EBF2Q9HAK2 575 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 HS3ST2Q9Y278 367 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 BTBD3Q9Y2F9 522 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 DOCK4Q8N1I0 1966 aa23.4■■□□□ 1.34
PTPN4-207ENST00000460162 C1QTNF3-AMACRE9PGA6 284 aa23.39■■□□□ 1.33
PTPN4-207ENST00000460162 LATO43561 262 aa23.39■■□□□ 1.33
PTPN4-207ENST00000460162 TFE3P19532 575 aaPredicted RBP23.39■■□□□ 1.33
PTPN4-207ENST00000460162 RNASE9P60153 205 aaKnown RBP23.39■■□□□ 1.33
PTPN4-207ENST00000460162 DEUP1Q05D60 604 aa23.39■■□□□ 1.33
PTPN4-207ENST00000460162 ACCSLQ4AC99 568 aa23.39■■□□□ 1.33
PTPN4-207ENST00000460162 KCNT1Q5JUK3 1230 aa23.39■■□□□ 1.33
PTPN4-207ENST00000460162 TAF3Q5VWG9 929 aa23.39■■□□□ 1.33
PTPN4-207ENST00000460162 NOP9Q86U38 636 aaKnown RBP23.39■■□□□ 1.33
PTPN4-207ENST00000460162 SLCO6A1Q86UG4 719 aa23.39■■□□□ 1.33
PTPN4-207ENST00000460162 ZNF683Q8IZ20 524 aa23.39■■□□□ 1.33
PTPN4-207ENST00000460162 SH2D3CQ8N5H7 860 aa23.39■■□□□ 1.33
PTPN4-207ENST00000460162 STK33Q9BYT3 514 aa23.39■■□□□ 1.33
PTPN4-207ENST00000460162 MUC3BQ9H195 1237 aa23.39■■□□□ 1.33
PTPN4-207ENST00000460162 ANLNQ9NQW6 1124 aa23.39■■□□□ 1.33
PTPN4-207ENST00000460162 TOR4AQ9NXH8 423 aa23.39■■□□□ 1.33
PTPN4-207ENST00000460162 PKD1L2Q7Z442 2459 aa23.38■■□□□ 1.33
PTPN4-207ENST00000460162 FAM208BQ5VWN6 2430 aa23.38■■□□□ 1.33
PTPN4-207ENST00000460162 A0A1B0GTQ1 180 aa23.38■■□□□ 1.33
PTPN4-207ENST00000460162 I6L893 689 aaPredicted RBP23.38■■□□□ 1.33
PTPN4-207ENST00000460162 DKK1O94907 266 aa23.38■■□□□ 1.33
PTPN4-207ENST00000460162 RHOCP08134 193 aa23.38■■□□□ 1.33
PTPN4-207ENST00000460162 CD38P28907 300 aa23.38■■□□□ 1.33
PTPN4-207ENST00000460162 KRT83P78385 493 aa23.38■■□□□ 1.33
PTPN4-207ENST00000460162 DLG2Q15700 870 aa23.38■■□□□ 1.33
PTPN4-207ENST00000460162 CLEC17AQ6ZS10 378 aa23.38■■□□□ 1.33
PTPN4-207ENST00000460162 Q6ZVU0 165 aa23.38■■□□□ 1.33
PTPN4-207ENST00000460162 SETD3Q86TU7 594 aaPredicted RBP23.38■■□□□ 1.33
PTPN4-207ENST00000460162 TBCBQ99426 244 aa23.38■■□□□ 1.33
PTPN4-207ENST00000460162 C2orf49Q9BVC5 232 aaPredicted RBP23.38■■□□□ 1.33
PTPN4-207ENST00000460162 AASDHPPTQ9NRN7 309 aa23.38■■□□□ 1.33
PTPN4-207ENST00000460162 TAB2Q9NYJ8 693 aa23.38■■□□□ 1.33
PTPN4-207ENST00000460162 PLXNB3Q9ULL4 1909 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 FREM2Q5SZK8 3169 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms