RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 VPS51Q9UID3 782 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 STON1Q9Y6Q2 735 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 A0A1W2PQF6 199 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 ILVBLA1L0T0 632 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 WASH4PA8MWX3 477 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 WASH3PC4AMC7 463 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 PSTPIP1O43586 416 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 MFSD11O43934 449 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 RAMP2O60895 175 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 MOCS3O95396 460 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 ASLP04424 464 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 PTMAP06454 111 aaKnown RBP13.15□□□□□ -0.3
COL18A1-206ENST00000459895 KRT7P08729 469 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 TNNT1P13805 278 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 ERCC2P18074 760 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 NTSR1P30989 418 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 ACVRL1P37023 503 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 ARL4AP40617 200 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 PLK1P53350 603 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 OXCT1P55809 520 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 MMRN1Q13201 1228 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 SLC12A1Q13621 1099 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 ENPP2Q13822 863 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 BOLA3Q53S33 107 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 EOGTQ5NDL2 527 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 KIAA1211LQ6NV74 962 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 DAAM2Q86T65 1068 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 LRRC57Q8N9N7 239 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 NETO2Q8NC67 525 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 FAM71BQ8TC56 605 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 UCMAQ8WVF2 138 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 HMCESQ96FZ2 354 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 CATSPERBQ9H7T0 1116 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 ATP13A1Q9HD20 1204 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 ETNK2Q9NVF9 386 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 ERVW-1Q9UQF0 538 aa13.15□□□□□ -0.3
COL18A1-206ENST00000459895 SHROOM3Q8TF72 1996 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 TCRBV21S2A2A0A5A6 115 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 LRRD1A4D1F6 860 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 DCLK1O15075 740 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 ATG13O75143 517 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 CCDC175P0C221 793 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 SLC1A1P43005 524 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 CXCL12P48061 93 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 PXNP49023 591 aaPredicted RBP13.14□□□□□ -0.31
COL18A1-206ENST00000459895 ZNF135P52742 658 aaPredicted RBP13.14□□□□□ -0.31
COL18A1-206ENST00000459895 ARF5P84085 180 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 ECT2LQ008S8 904 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 KIF5AQ12840 1032 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 TCF15Q12870 199 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 CRY1Q16526 586 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 LINGO4Q6UY18 593 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 ZNF783Q6ZMS7 281 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 CACUL1Q86Y37 369 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 ARHGAP12Q8IWW6 846 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 RHOT1Q8IXI2 618 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 TXLNBQ8N3L3 684 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 MDGA1Q8NFP4 955 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 TSTD1Q8NFU3 115 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 KCNV2Q8TDN2 545 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 KRT35Q92764 455 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 ARHGEF2Q92974 986 aaKnown RBP13.14□□□□□ -0.31
COL18A1-206ENST00000459895 CELF6Q96J87 481 aaKnown RBP13.14□□□□□ -0.31
COL18A1-206ENST00000459895 RPL10LQ96L21 214 aaKnown RBP13.14□□□□□ -0.31
COL18A1-206ENST00000459895 ZNF670Q9BS34 389 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 C2orf49Q9BVC5 232 aaPredicted RBP13.14□□□□□ -0.31
COL18A1-206ENST00000459895 CALN1Q9BXU9 219 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 KLC2Q9H0B6 622 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 TMEM245Q9H330 911 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 MTG2Q9H4K7 406 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 RAPGEFL1Q9UHV5 662 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 SLC25A13Q9UJS0 675 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 SLC8A2Q9UPR5 921 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 MYO15AQ9UKN7 3530 aa13.14□□□□□ -0.31
COL18A1-206ENST00000459895 MYO18AQ92614 2054 aaKnown RBP13.13□□□□□ -0.31
COL18A1-206ENST00000459895 C3orf70A6NLC5 250 aaPredicted RBP13.13□□□□□ -0.31
COL18A1-206ENST00000459895 TTC34A8MYJ7 566 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 CBX4O00257 560 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 NPC1O15118 1278 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 DAPK3O43293 454 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 NRDCO43847 1150 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 ZMPSTE24O75844 475 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 ATP5BP06576 529 aaKnown RBP13.13□□□□□ -0.31
COL18A1-206ENST00000459895 EPHX1P07099 455 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 VAV1P15498 845 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 NUBP1P53384 320 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 NAP1L1P55209 391 aaKnown RBP13.13□□□□□ -0.31
COL18A1-206ENST00000459895 CSTF1Q05048 431 aaKnown RBP13.13□□□□□ -0.31
COL18A1-206ENST00000459895 ZFYVE27Q5T4F4 411 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 LRRC38Q5VT99 294 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 AFMIDQ63HM1 303 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 NCBP2-AS2Q69YL0 99 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 ANO7Q6IWH7 933 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 TP53INP2Q8IXH6 220 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 UMODL1-AS1Q8N2C9 162 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 RAPGEF5Q92565 580 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 FAF2Q96CS3 445 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 ZNF830Q96NB3 372 aaPredicted RBP13.13□□□□□ -0.31
COL18A1-206ENST00000459895 TPSD1Q9BZJ3 242 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 TSGA10Q9BZW7 698 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms