RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SOCS4Q8WXH5 440 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 FATE1Q969F0 183 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 SPDL1Q96EA4 605 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 CNDP1Q96KN2 507 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 UROC1Q96N76 676 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 TRAPPC9Q96Q05 1148 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 HAPLN3Q96S86 360 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 GPR22Q99680 433 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 RTKNQ9BST9 563 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 FAM167BQ9BTA0 163 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 THTPAQ9BU02 230 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 ULBP1Q9BZM6 244 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 UBE2OQ9C0C9 1292 aaKnown RBP9.03□□□□□ -0.96
HDAC3-202ENST00000459727 CDH19Q9H159 772 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 TSPYL2Q9H2G4 693 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-202ENST00000459727 RHOJQ9H4E5 214 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 Q9H521 79 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 WDCPQ9H6R7 721 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 CATSPERBQ9H7T0 1116 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 UGT1A7Q9HAW7 530 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 UGT1A10Q9HAW8 530 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 UGT1A8Q9HAW9 530 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 NMRAL1Q9HBL8 299 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 CSNK1G1Q9HCP0 422 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 TRPC7Q9HCX4 862 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 PIGVQ9NUD9 493 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 DDIT4Q9NX09 232 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 DDX43Q9NXZ2 648 aaKnown RBP9.03□□□□□ -0.96
HDAC3-202ENST00000459727 ARMCX1Q9P291 453 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 GNEQ9Y223 722 aaKnown RBP9.03□□□□□ -0.96
HDAC3-202ENST00000459727 RAP2CQ9Y3L5 183 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 MGAMO43451 1857 aa9.02□□□□□ -0.96
HDAC3-202ENST00000459727 SBF1O95248 1867 aa9.02□□□□□ -0.96
HDAC3-202ENST00000459727 A0A087X1B8 175 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 ARHGAP42A6NI28 874 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 PRR5-ARHGAP8B1AHC4 643 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 CACNG3O60359 315 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 TBX10O75333 385 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 DDHD2O94830 711 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 GSRP00390 522 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 KITP10721 976 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 THRAP10827 490 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 NCAM1P13591 858 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 HOXB8P17481 243 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-202ENST00000459727 IDH3AP50213 366 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 ATXN1P54253 815 aaKnown RBP9.02□□□□□ -0.97
HDAC3-202ENST00000459727 RPL10AP62906 217 aaKnown RBP9.02□□□□□ -0.97
HDAC3-202ENST00000459727 ARHGAP8P85298 464 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 KDSRQ06136 332 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 TUBB3Q13509 450 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 SLC12A1Q13621 1099 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 LAMB3Q13751 1172 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 PCID2Q5JVF3 399 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 C9orf131Q5VYM1 1079 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 LIPMQ5VYY2 423 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 BSPRYQ5W0U4 402 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 WSCD1Q658N2 575 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 ZYG11AQ6WRX3 759 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 SDCCAG8Q86SQ7 713 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-202ENST00000459727 CLEC14AQ86T13 490 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 TREML1Q86YW5 311 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 C10orf107Q8IVU9 208 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 CNTN4Q8IWV2 1026 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 UNC5BQ8IZJ1 945 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 PYROXD2Q8N2H3 581 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 PPHLN1Q8NEY8 458 aaKnown RBP9.02□□□□□ -0.97
HDAC3-202ENST00000459727 OR52K1Q8NGK4 314 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 CALML6Q8TD86 181 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 SCG3Q8WXD2 468 aaKnown RBP9.02□□□□□ -0.97
HDAC3-202ENST00000459727 DLG3Q92796 817 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 PPP2R3CQ969Q6 453 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 FAM136AQ96C01 138 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 MS4A4AQ96JQ5 239 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 SENP8Q96LD8 212 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 TEKT5Q96M29 485 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 FCRL5Q96RD9 977 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 KIFC1Q9BW19 673 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 COLEC11Q9BWP8 271 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 WDR6Q9NNW5 1121 aaKnown RBP9.02□□□□□ -0.97
HDAC3-202ENST00000459727 DMAP1Q9NPF5 467 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-202ENST00000459727 ENTPD7Q9NQZ7 604 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 C20orf96Q9NUD7 363 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-202ENST00000459727 ZDHHC7Q9NXF8 308 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-202ENST00000459727 MARCOQ9UEW3 520 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-202ENST00000459727 SLC7A8Q9UHI5 535 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 VPS28Q9UK41 221 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 HES2Q9Y543 173 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 TRPV2Q9Y5S1 764 aa9.02□□□□□ -0.97
HDAC3-202ENST00000459727 ZCWPW2A0A1B0GU75 182 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 TRPC5OSA6NMA1 111 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 GPR182O15218 404 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 HDAC3O15379 428 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 PEX1O43933 1283 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 CYP11A1P05108 521 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 ERVK-10P10266 1014 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 SLC2A3P11169 496 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 RGS2P41220 211 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 GRIA1P42261 906 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 NUMBP49757 651 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms